Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Abca4O35600 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.86■□□□□ 0.93
Abca4O35600 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Abca4O35600 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Abca4O35600 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Abca4O35600 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.85■□□□□ 0.93
Abca4O35600 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.84■□□□□ 0.93
Abca4O35600 Gm10493-201ENSMUST00000097270 612 ntBASIC20.84■□□□□ 0.93
Abca4O35600 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.84■□□□□ 0.93
Abca4O35600 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Abca4O35600 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Abca4O35600 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Abca4O35600 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.83■□□□□ 0.93
Abca4O35600 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Abca4O35600 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.83■□□□□ 0.93
Abca4O35600 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Abca4O35600 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Abca4O35600 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Abca4O35600 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Abca4O35600 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Abca4O35600 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Abca4O35600 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Abca4O35600 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.82■□□□□ 0.92
Abca4O35600 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Abca4O35600 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.82■□□□□ 0.92
Abca4O35600 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
Abca4O35600 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Abca4O35600 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Abca4O35600 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Abca4O35600 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Abca4O35600 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Abca4O35600 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Abca4O35600 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Abca4O35600 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.8■□□□□ 0.92
Abca4O35600 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Abca4O35600 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
Abca4O35600 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Abca4O35600 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Abca4O35600 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Abca4O35600 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Abca4O35600 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.79■□□□□ 0.92
Abca4O35600 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Abca4O35600 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.79■□□□□ 0.92
Abca4O35600 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Abca4O35600 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Abca4O35600 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.79■□□□□ 0.92
Abca4O35600 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Abca4O35600 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.78■□□□□ 0.92
Abca4O35600 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Abca4O35600 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Abca4O35600 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.78■□□□□ 0.92
Abca4O35600 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Abca4O35600 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Abca4O35600 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Abca4O35600 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Abca4O35600 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.77■□□□□ 0.92
Abca4O35600 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
Abca4O35600 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Abca4O35600 Gm42569-201ENSMUST00000200539 472 ntBASIC20.77■□□□□ 0.92
Abca4O35600 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Abca4O35600 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Abca4O35600 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Abca4O35600 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Abca4O35600 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Abca4O35600 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.75■□□□□ 0.91
Abca4O35600 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.75■□□□□ 0.91
Abca4O35600 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.75■□□□□ 0.91
Abca4O35600 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
Abca4O35600 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Abca4O35600 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Abca4O35600 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.74■□□□□ 0.91
Abca4O35600 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Abca4O35600 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.74■□□□□ 0.91
Abca4O35600 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Abca4O35600 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Abca4O35600 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Abca4O35600 Gm42642-201ENSMUST00000200683 355 ntBASIC20.73■□□□□ 0.91
Abca4O35600 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.73■□□□□ 0.91
Abca4O35600 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Abca4O35600 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Abca4O35600 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Abca4O35600 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Abca4O35600 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Abca4O35600 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Abca4O35600 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Abca4O35600 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.72■□□□□ 0.91
Abca4O35600 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Abca4O35600 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Abca4O35600 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Abca4O35600 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Abca4O35600 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.71■□□□□ 0.91
Abca4O35600 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Abca4O35600 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Abca4O35600 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.71■□□□□ 0.91
Abca4O35600 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.71■□□□□ 0.91
Abca4O35600 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Abca4O35600 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Abca4O35600 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Abca4O35600 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.7■□□□□ 0.9
Abca4O35600 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 9.5 ms