Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc1a6O35544 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc1a6O35544 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc1a6O35544 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.15■□□□□ 0.98
Slc1a6O35544 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Slc1a6O35544 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
Slc1a6O35544 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slc1a6O35544 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Slc1a6O35544 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slc1a6O35544 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.14■□□□□ 0.97
Slc1a6O35544 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slc1a6O35544 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Slc1a6O35544 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slc1a6O35544 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Slc1a6O35544 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Slc1a6O35544 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc1a6O35544 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc1a6O35544 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Slc1a6O35544 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Slc1a6O35544 Gm7432-201ENSMUST00000210343 879 ntBASIC21.11■□□□□ 0.97
Slc1a6O35544 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Slc1a6O35544 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc1a6O35544 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Slc1a6O35544 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc1a6O35544 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc1a6O35544 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc1a6O35544 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Slc1a6O35544 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc1a6O35544 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc1a6O35544 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.09■□□□□ 0.97
Slc1a6O35544 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc1a6O35544 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc1a6O35544 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc1a6O35544 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Slc1a6O35544 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Slc1a6O35544 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Slc1a6O35544 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.08■□□□□ 0.97
Slc1a6O35544 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.08■□□□□ 0.97
Slc1a6O35544 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.08■□□□□ 0.97
Slc1a6O35544 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Slc1a6O35544 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc1a6O35544 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Slc1a6O35544 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc1a6O35544 Gm11599-201ENSMUST00000118720 878 ntBASIC21.07■□□□□ 0.96
Slc1a6O35544 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc1a6O35544 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Slc1a6O35544 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc1a6O35544 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc1a6O35544 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc1a6O35544 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc1a6O35544 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc1a6O35544 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc1a6O35544 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc1a6O35544 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc1a6O35544 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc1a6O35544 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc1a6O35544 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.05■□□□□ 0.96
Slc1a6O35544 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc1a6O35544 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Slc1a6O35544 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Slc1a6O35544 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.05■□□□□ 0.96
Slc1a6O35544 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Slc1a6O35544 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slc1a6O35544 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
Slc1a6O35544 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Slc1a6O35544 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Slc1a6O35544 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slc1a6O35544 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slc1a6O35544 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.04■□□□□ 0.96
Slc1a6O35544 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slc1a6O35544 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slc1a6O35544 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.03■□□□□ 0.96
Slc1a6O35544 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slc1a6O35544 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slc1a6O35544 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slc1a6O35544 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Slc1a6O35544 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slc1a6O35544 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slc1a6O35544 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slc1a6O35544 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.02■□□□□ 0.96
Slc1a6O35544 Gm44428-201ENSMUST00000204474 874 ntBASIC21.02■□□□□ 0.96
Slc1a6O35544 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.02■□□□□ 0.96
Slc1a6O35544 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slc1a6O35544 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slc1a6O35544 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Slc1a6O35544 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slc1a6O35544 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.01■□□□□ 0.95
Slc1a6O35544 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slc1a6O35544 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slc1a6O35544 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Slc1a6O35544 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Slc1a6O35544 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Slc1a6O35544 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Slc1a6O35544 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
Slc1a6O35544 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.99■□□□□ 0.95
Slc1a6O35544 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Slc1a6O35544 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slc1a6O35544 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Slc1a6O35544 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Slc1a6O35544 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms