Protein–RNA interactions for Protein: E9PXX9

Slc28a1, Sodium/nucleoside cotransporter, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a1E9PXX9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc28a1E9PXX9 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc28a1E9PXX9 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc28a1E9PXX9 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc28a1E9PXX9 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Slc28a1E9PXX9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.2■□□□□ 0.82
Slc28a1E9PXX9 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc28a1E9PXX9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc28a1E9PXX9 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc28a1E9PXX9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc28a1E9PXX9 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc28a1E9PXX9 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Slc28a1E9PXX9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Slc28a1E9PXX9 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.19■□□□□ 0.82
Slc28a1E9PXX9 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Slc28a1E9PXX9 Gm8503-201ENSMUST00000118131 455 ntBASIC20.19■□□□□ 0.82
Slc28a1E9PXX9 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slc28a1E9PXX9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Slc28a1E9PXX9 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slc28a1E9PXX9 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Slc28a1E9PXX9 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc28a1E9PXX9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Slc28a1E9PXX9 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc28a1E9PXX9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.18■□□□□ 0.82
Slc28a1E9PXX9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Slc28a1E9PXX9 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Slc28a1E9PXX9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc28a1E9PXX9 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Slc28a1E9PXX9 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc28a1E9PXX9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc28a1E9PXX9 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc28a1E9PXX9 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.16■□□□□ 0.82
Slc28a1E9PXX9 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.16■□□□□ 0.82
Slc28a1E9PXX9 Mir3960-201ENSMUST00000198213 73 ntBASIC20.16■□□□□ 0.82
Slc28a1E9PXX9 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc28a1E9PXX9 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc28a1E9PXX9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Slc28a1E9PXX9 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc28a1E9PXX9 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc28a1E9PXX9 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Slc28a1E9PXX9 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc28a1E9PXX9 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.15■□□□□ 0.82
Slc28a1E9PXX9 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc28a1E9PXX9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc28a1E9PXX9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Slc28a1E9PXX9 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Slc28a1E9PXX9 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
Slc28a1E9PXX9 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc28a1E9PXX9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
Slc28a1E9PXX9 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc28a1E9PXX9 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc28a1E9PXX9 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc28a1E9PXX9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.13■□□□□ 0.81
Slc28a1E9PXX9 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc28a1E9PXX9 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc28a1E9PXX9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Slc28a1E9PXX9 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc28a1E9PXX9 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.12■□□□□ 0.81
Slc28a1E9PXX9 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Slc28a1E9PXX9 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc28a1E9PXX9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc28a1E9PXX9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc28a1E9PXX9 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
Slc28a1E9PXX9 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc28a1E9PXX9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc28a1E9PXX9 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc28a1E9PXX9 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Slc28a1E9PXX9 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Slc28a1E9PXX9 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc28a1E9PXX9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.11■□□□□ 0.81
Slc28a1E9PXX9 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Slc28a1E9PXX9 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc28a1E9PXX9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc28a1E9PXX9 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.1■□□□□ 0.81
Slc28a1E9PXX9 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc28a1E9PXX9 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc28a1E9PXX9 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.1■□□□□ 0.81
Slc28a1E9PXX9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc28a1E9PXX9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc28a1E9PXX9 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc28a1E9PXX9 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Slc28a1E9PXX9 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Slc28a1E9PXX9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Slc28a1E9PXX9 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc28a1E9PXX9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Slc28a1E9PXX9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc28a1E9PXX9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc28a1E9PXX9 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc28a1E9PXX9 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc28a1E9PXX9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc28a1E9PXX9 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc28a1E9PXX9 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Slc28a1E9PXX9 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Slc28a1E9PXX9 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc28a1E9PXX9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc28a1E9PXX9 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc28a1E9PXX9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc28a1E9PXX9 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc28a1E9PXX9 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Slc28a1E9PXX9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms