Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.85■□□□□ 0.61
Gm11127A7VMS2 Gm9812-201ENSMUST00000061934 968 ntBASIC18.85■□□□□ 0.61
Gm11127A7VMS2 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm11127A7VMS2 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Gm11127A7VMS2 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.85■□□□□ 0.61
Gm11127A7VMS2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm11127A7VMS2 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Gm11127A7VMS2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm11127A7VMS2 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm11127A7VMS2 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.84■□□□□ 0.61
Gm11127A7VMS2 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.84■□□□□ 0.61
Gm11127A7VMS2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.84■□□□□ 0.61
Gm11127A7VMS2 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm11127A7VMS2 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm11127A7VMS2 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gm11127A7VMS2 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Gm11127A7VMS2 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gm11127A7VMS2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm11127A7VMS2 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gm11127A7VMS2 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm11127A7VMS2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.83■□□□□ 0.6
Gm11127A7VMS2 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.83■□□□□ 0.6
Gm11127A7VMS2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.83■□□□□ 0.6
Gm11127A7VMS2 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.83■□□□□ 0.6
Gm11127A7VMS2 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm11127A7VMS2 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.83■□□□□ 0.6
Gm11127A7VMS2 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Gm11127A7VMS2 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm11127A7VMS2 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gm11127A7VMS2 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.82■□□□□ 0.6
Gm11127A7VMS2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm11127A7VMS2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm11127A7VMS2 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Gm11127A7VMS2 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.82■□□□□ 0.6
Gm11127A7VMS2 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm11127A7VMS2 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm11127A7VMS2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.82■□□□□ 0.6
Gm11127A7VMS2 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Gm11127A7VMS2 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.81■□□□□ 0.6
Gm11127A7VMS2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm11127A7VMS2 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Gm11127A7VMS2 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm11127A7VMS2 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.81■□□□□ 0.6
Gm11127A7VMS2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.81■□□□□ 0.6
Gm11127A7VMS2 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm11127A7VMS2 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm11127A7VMS2 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm11127A7VMS2 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm11127A7VMS2 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Gm11127A7VMS2 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gm11127A7VMS2 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
Gm11127A7VMS2 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.8■□□□□ 0.6
Gm11127A7VMS2 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm11127A7VMS2 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gm11127A7VMS2 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.8■□□□□ 0.6
Gm11127A7VMS2 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm11127A7VMS2 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm11127A7VMS2 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm11127A7VMS2 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.79■□□□□ 0.6
Gm11127A7VMS2 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm11127A7VMS2 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm11127A7VMS2 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gm11127A7VMS2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm11127A7VMS2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gm11127A7VMS2 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm11127A7VMS2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Gm11127A7VMS2 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm11127A7VMS2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm11127A7VMS2 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.78■□□□□ 0.6
Gm11127A7VMS2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm11127A7VMS2 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Gm11127A7VMS2 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm11127A7VMS2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm11127A7VMS2 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm11127A7VMS2 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm11127A7VMS2 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Gm11127A7VMS2 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm11127A7VMS2 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm11127A7VMS2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Gm11127A7VMS2 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gm11127A7VMS2 Terc-201ENSMUST00000082862 423 ntBASIC18.77■□□□□ 0.6
Gm11127A7VMS2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gm11127A7VMS2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gm11127A7VMS2 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gm11127A7VMS2 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
Gm11127A7VMS2 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm11127A7VMS2 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm11127A7VMS2 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.76■□□□□ 0.59
Gm11127A7VMS2 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.76■□□□□ 0.59
Gm11127A7VMS2 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.76■□□□□ 0.59
Gm11127A7VMS2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm11127A7VMS2 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Gm11127A7VMS2 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm11127A7VMS2 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Gm11127A7VMS2 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm11127A7VMS2 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm11127A7VMS2 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm11127A7VMS2 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm11127A7VMS2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm11127A7VMS2 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms