Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav12-1A0N8R1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trav12-1A0N8R1 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav12-1A0N8R1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.92■□□□□ 0.46
Trav12-1A0N8R1 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav12-1A0N8R1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Trav12-1A0N8R1 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Trav12-1A0N8R1 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav12-1A0N8R1 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav12-1A0N8R1 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav12-1A0N8R1 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.91■□□□□ 0.46
Trav12-1A0N8R1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav12-1A0N8R1 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav12-1A0N8R1 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav12-1A0N8R1 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Trav12-1A0N8R1 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Trav12-1A0N8R1 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trav12-1A0N8R1 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.9■□□□□ 0.46
Trav12-1A0N8R1 Gm6311-201ENSMUST00000073790 878 ntBASIC17.9■□□□□ 0.46
Trav12-1A0N8R1 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav12-1A0N8R1 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav12-1A0N8R1 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav12-1A0N8R1 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav12-1A0N8R1 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav12-1A0N8R1 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav12-1A0N8R1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.89■□□□□ 0.45
Trav12-1A0N8R1 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav12-1A0N8R1 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav12-1A0N8R1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav12-1A0N8R1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Trav12-1A0N8R1 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav12-1A0N8R1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav12-1A0N8R1 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Trav12-1A0N8R1 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Trav12-1A0N8R1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC17.88■□□□□ 0.45
Trav12-1A0N8R1 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Trav12-1A0N8R1 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav12-1A0N8R1 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav12-1A0N8R1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Trav12-1A0N8R1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Trav12-1A0N8R1 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.87■□□□□ 0.45
Trav12-1A0N8R1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav12-1A0N8R1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav12-1A0N8R1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Trav12-1A0N8R1 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Trav12-1A0N8R1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav12-1A0N8R1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav12-1A0N8R1 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav12-1A0N8R1 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Trav12-1A0N8R1 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav12-1A0N8R1 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav12-1A0N8R1 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav12-1A0N8R1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav12-1A0N8R1 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav12-1A0N8R1 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav12-1A0N8R1 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav12-1A0N8R1 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav12-1A0N8R1 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav12-1A0N8R1 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav12-1A0N8R1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav12-1A0N8R1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Trav12-1A0N8R1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.85■□□□□ 0.45
Trav12-1A0N8R1 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav12-1A0N8R1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav12-1A0N8R1 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav12-1A0N8R1 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav12-1A0N8R1 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav12-1A0N8R1 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav12-1A0N8R1 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav12-1A0N8R1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.84■□□□□ 0.45
Trav12-1A0N8R1 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav12-1A0N8R1 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav12-1A0N8R1 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
Trav12-1A0N8R1 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trav12-1A0N8R1 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC17.84■□□□□ 0.45
Trav12-1A0N8R1 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav12-1A0N8R1 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav12-1A0N8R1 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav12-1A0N8R1 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav12-1A0N8R1 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.83■□□□□ 0.45
Trav12-1A0N8R1 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav12-1A0N8R1 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav12-1A0N8R1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav12-1A0N8R1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.82■□□□□ 0.44
Trav12-1A0N8R1 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.82■□□□□ 0.44
Trav12-1A0N8R1 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Trav12-1A0N8R1 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav12-1A0N8R1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav12-1A0N8R1 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav12-1A0N8R1 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trav12-1A0N8R1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav12-1A0N8R1 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav12-1A0N8R1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav12-1A0N8R1 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav12-1A0N8R1 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav12-1A0N8R1 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Trav12-1A0N8R1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav12-1A0N8R1 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trav12-1A0N8R1 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav12-1A0N8R1 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms