Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv12-1A0A0B4J1H0 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv12-1A0A0B4J1H0 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv12-1A0A0B4J1H0 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv12-1A0A0B4J1H0 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv12-1A0A0B4J1H0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.13■□□□□ 0.65
Trbv12-1A0A0B4J1H0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Trbv12-1A0A0B4J1H0 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trbv12-1A0A0B4J1H0 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trbv12-1A0A0B4J1H0 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trbv12-1A0A0B4J1H0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trbv12-1A0A0B4J1H0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Trbv12-1A0A0B4J1H0 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trbv12-1A0A0B4J1H0 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.11■□□□□ 0.65
Trbv12-1A0A0B4J1H0 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trbv12-1A0A0B4J1H0 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trbv12-1A0A0B4J1H0 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.1■□□□□ 0.65
Trbv12-1A0A0B4J1H0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.1■□□□□ 0.65
Trbv12-1A0A0B4J1H0 Gm43566-201ENSMUST00000196851 808 ntBASIC19.1■□□□□ 0.65
Trbv12-1A0A0B4J1H0 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trbv12-1A0A0B4J1H0 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Trbv12-1A0A0B4J1H0 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trbv12-1A0A0B4J1H0 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trbv12-1A0A0B4J1H0 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trbv12-1A0A0B4J1H0 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trbv12-1A0A0B4J1H0 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trbv12-1A0A0B4J1H0 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trbv12-1A0A0B4J1H0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trbv12-1A0A0B4J1H0 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.09■□□□□ 0.65
Trbv12-1A0A0B4J1H0 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trbv12-1A0A0B4J1H0 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.08■□□□□ 0.65
Trbv12-1A0A0B4J1H0 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
Trbv12-1A0A0B4J1H0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trbv12-1A0A0B4J1H0 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trbv12-1A0A0B4J1H0 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trbv12-1A0A0B4J1H0 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trbv12-1A0A0B4J1H0 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Trbv12-1A0A0B4J1H0 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
Trbv12-1A0A0B4J1H0 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trbv12-1A0A0B4J1H0 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trbv12-1A0A0B4J1H0 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trbv12-1A0A0B4J1H0 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trbv12-1A0A0B4J1H0 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trbv12-1A0A0B4J1H0 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Trbv12-1A0A0B4J1H0 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trbv12-1A0A0B4J1H0 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trbv12-1A0A0B4J1H0 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.06■□□□□ 0.64
Trbv12-1A0A0B4J1H0 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trbv12-1A0A0B4J1H0 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trbv12-1A0A0B4J1H0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.05■□□□□ 0.64
Trbv12-1A0A0B4J1H0 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trbv12-1A0A0B4J1H0 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trbv12-1A0A0B4J1H0 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trbv12-1A0A0B4J1H0 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trbv12-1A0A0B4J1H0 Gm13238-201ENSMUST00000117655 780 ntBASIC19.05■□□□□ 0.64
Trbv12-1A0A0B4J1H0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trbv12-1A0A0B4J1H0 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trbv12-1A0A0B4J1H0 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trbv12-1A0A0B4J1H0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trbv12-1A0A0B4J1H0 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trbv12-1A0A0B4J1H0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trbv12-1A0A0B4J1H0 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trbv12-1A0A0B4J1H0 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trbv12-1A0A0B4J1H0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trbv12-1A0A0B4J1H0 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.04■□□□□ 0.64
Trbv12-1A0A0B4J1H0 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trbv12-1A0A0B4J1H0 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trbv12-1A0A0B4J1H0 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.03■□□□□ 0.64
Trbv12-1A0A0B4J1H0 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.03■□□□□ 0.64
Trbv12-1A0A0B4J1H0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trbv12-1A0A0B4J1H0 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trbv12-1A0A0B4J1H0 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Trbv12-1A0A0B4J1H0 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.02■□□□□ 0.64
Trbv12-1A0A0B4J1H0 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trbv12-1A0A0B4J1H0 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trbv12-1A0A0B4J1H0 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.02■□□□□ 0.64
Trbv12-1A0A0B4J1H0 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trbv12-1A0A0B4J1H0 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Trbv12-1A0A0B4J1H0 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.02■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.01■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.01■□□□□ 0.63
Trbv12-1A0A0B4J1H0 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.01■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Gm28536-201ENSMUST00000190971 1317 ntBASIC19■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.99■□□□□ 0.63
Trbv12-1A0A0B4J1H0 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms