Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Rtn4rl1Q8K0S5 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rtn4rl1Q8K0S5 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rtn4rl1Q8K0S5 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rtn4rl1Q8K0S5 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rtn4rl1Q8K0S5 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Rtn4rl1Q8K0S5 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rtn4rl1Q8K0S5 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Rtn4rl1Q8K0S5 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Rtn4rl1Q8K0S5 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rtn4rl1Q8K0S5 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rtn4rl1Q8K0S5 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rtn4rl1Q8K0S5 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rtn4rl1Q8K0S5 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rtn4rl1Q8K0S5 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rtn4rl1Q8K0S5 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rtn4rl1Q8K0S5 AC113441.2-201ENSMUST00000221538 1468 ntBASIC13.5□□□□□ -0.25
Rtn4rl1Q8K0S5 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rtn4rl1Q8K0S5 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rtn4rl1Q8K0S5 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rtn4rl1Q8K0S5 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC13.5□□□□□ -0.25
Rtn4rl1Q8K0S5 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.5□□□□□ -0.25
Rtn4rl1Q8K0S5 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.5□□□□□ -0.25
Rtn4rl1Q8K0S5 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rtn4rl1Q8K0S5 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rtn4rl1Q8K0S5 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Rtn4rl1Q8K0S5 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Rtn4rl1Q8K0S5 Gm43068-201ENSMUST00000201095 1273 ntBASIC13.5□□□□□ -0.25
Rtn4rl1Q8K0S5 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.5□□□□□ -0.25
Rtn4rl1Q8K0S5 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.5□□□□□ -0.25
Rtn4rl1Q8K0S5 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rtn4rl1Q8K0S5 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rtn4rl1Q8K0S5 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Rtn4rl1Q8K0S5 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rtn4rl1Q8K0S5 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Rtn4rl1Q8K0S5 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.5□□□□□ -0.25
Rtn4rl1Q8K0S5 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rtn4rl1Q8K0S5 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rtn4rl1Q8K0S5 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rtn4rl1Q8K0S5 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rtn4rl1Q8K0S5 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Rtn4rl1Q8K0S5 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Rtn4rl1Q8K0S5 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rtn4rl1Q8K0S5 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rtn4rl1Q8K0S5 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rtn4rl1Q8K0S5 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rtn4rl1Q8K0S5 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rtn4rl1Q8K0S5 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rtn4rl1Q8K0S5 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC13.49□□□□□ -0.25
Rtn4rl1Q8K0S5 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rtn4rl1Q8K0S5 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rtn4rl1Q8K0S5 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.49□□□□□ -0.25
Rtn4rl1Q8K0S5 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rtn4rl1Q8K0S5 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rtn4rl1Q8K0S5 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Rtn4rl1Q8K0S5 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rtn4rl1Q8K0S5 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Rtn4rl1Q8K0S5 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rtn4rl1Q8K0S5 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rtn4rl1Q8K0S5 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rtn4rl1Q8K0S5 Gm12502-201ENSMUST00000120197 444 ntBASIC13.49□□□□□ -0.25
Rtn4rl1Q8K0S5 Gm14726-201ENSMUST00000120623 896 ntBASIC13.49□□□□□ -0.25
Rtn4rl1Q8K0S5 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.49□□□□□ -0.25
Rtn4rl1Q8K0S5 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rtn4rl1Q8K0S5 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rtn4rl1Q8K0S5 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rtn4rl1Q8K0S5 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rtn4rl1Q8K0S5 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Rtn4rl1Q8K0S5 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rtn4rl1Q8K0S5 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rtn4rl1Q8K0S5 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.49□□□□□ -0.25
Rtn4rl1Q8K0S5 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Rtn4rl1Q8K0S5 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.49□□□□□ -0.25
Rtn4rl1Q8K0S5 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rtn4rl1Q8K0S5 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rtn4rl1Q8K0S5 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rtn4rl1Q8K0S5 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Rtn4rl1Q8K0S5 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rtn4rl1Q8K0S5 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rtn4rl1Q8K0S5 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.48□□□□□ -0.25
Rtn4rl1Q8K0S5 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rtn4rl1Q8K0S5 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rtn4rl1Q8K0S5 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rtn4rl1Q8K0S5 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rtn4rl1Q8K0S5 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rtn4rl1Q8K0S5 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rtn4rl1Q8K0S5 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC13.48□□□□□ -0.25
Rtn4rl1Q8K0S5 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rtn4rl1Q8K0S5 Gm16505-201ENSMUST00000179981 232 ntBASIC13.48□□□□□ -0.25
Rtn4rl1Q8K0S5 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.48□□□□□ -0.25
Rtn4rl1Q8K0S5 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Rtn4rl1Q8K0S5 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rtn4rl1Q8K0S5 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Rtn4rl1Q8K0S5 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.48□□□□□ -0.25
Rtn4rl1Q8K0S5 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC13.48□□□□□ -0.25
Rtn4rl1Q8K0S5 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Rtn4rl1Q8K0S5 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.48□□□□□ -0.25
Rtn4rl1Q8K0S5 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rtn4rl1Q8K0S5 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rtn4rl1Q8K0S5 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms