Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.07□□□□□ -0.48
Lysmd4Q8CC84 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.07□□□□□ -0.48
Lysmd4Q8CC84 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Lysmd4Q8CC84 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lysmd4Q8CC84 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lysmd4Q8CC84 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lysmd4Q8CC84 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.07□□□□□ -0.48
Lysmd4Q8CC84 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lysmd4Q8CC84 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Lysmd4Q8CC84 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lysmd4Q8CC84 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lysmd4Q8CC84 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Lysmd4Q8CC84 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Lysmd4Q8CC84 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lysmd4Q8CC84 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lysmd4Q8CC84 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lysmd4Q8CC84 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Gm15460-201ENSMUST00000118147 391 ntBASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Gm45841-201ENSMUST00000207700 164 ntBASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lysmd4Q8CC84 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd4Q8CC84 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.05□□□□□ -0.48
Lysmd4Q8CC84 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd4Q8CC84 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd4Q8CC84 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd4Q8CC84 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd4Q8CC84 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd4Q8CC84 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd4Q8CC84 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd4Q8CC84 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Lysmd4Q8CC84 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd4Q8CC84 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd4Q8CC84 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd4Q8CC84 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd4Q8CC84 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd4Q8CC84 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd4Q8CC84 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.05□□□□□ -0.48
Lysmd4Q8CC84 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.05□□□□□ -0.48
Lysmd4Q8CC84 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd4Q8CC84 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd4Q8CC84 Gm18889-201ENSMUST00000174284 929 ntBASIC12.05□□□□□ -0.48
Lysmd4Q8CC84 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd4Q8CC84 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.05□□□□□ -0.48
Lysmd4Q8CC84 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.05□□□□□ -0.48
Lysmd4Q8CC84 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.05□□□□□ -0.48
Lysmd4Q8CC84 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Lysmd4Q8CC84 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd4Q8CC84 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.05□□□□□ -0.48
Lysmd4Q8CC84 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd4Q8CC84 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Lysmd4Q8CC84 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd4Q8CC84 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lysmd4Q8CC84 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms