Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cpne3Q8BT60 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cpne3Q8BT60 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpne3Q8BT60 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpne3Q8BT60 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cpne3Q8BT60 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cpne3Q8BT60 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.02□□□□□ -0.33
Cpne3Q8BT60 Gm14767-201ENSMUST00000121559 586 ntBASIC13.02□□□□□ -0.33
Cpne3Q8BT60 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.02□□□□□ -0.33
Cpne3Q8BT60 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cpne3Q8BT60 Gm3436-201ENSMUST00000179930 840 ntBASIC13.02□□□□□ -0.33
Cpne3Q8BT60 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.02□□□□□ -0.33
Cpne3Q8BT60 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Cpne3Q8BT60 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpne3Q8BT60 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpne3Q8BT60 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpne3Q8BT60 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.02□□□□□ -0.33
Cpne3Q8BT60 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpne3Q8BT60 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpne3Q8BT60 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpne3Q8BT60 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpne3Q8BT60 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpne3Q8BT60 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpne3Q8BT60 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.02□□□□□ -0.33
Cpne3Q8BT60 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpne3Q8BT60 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Cpne3Q8BT60 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.02□□□□□ -0.33
Cpne3Q8BT60 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpne3Q8BT60 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cpne3Q8BT60 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cpne3Q8BT60 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cpne3Q8BT60 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpne3Q8BT60 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpne3Q8BT60 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Cpne3Q8BT60 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpne3Q8BT60 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Gm12585-201ENSMUST00000117307 290 ntBASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpne3Q8BT60 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cpne3Q8BT60 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Cpne3Q8BT60 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cpne3Q8BT60 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cpne3Q8BT60 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cpne3Q8BT60 Gm37795-201ENSMUST00000194216 2459 ntBASIC13□□□□□ -0.33
Cpne3Q8BT60 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cpne3Q8BT60 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cpne3Q8BT60 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cpne3Q8BT60 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cpne3Q8BT60 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cpne3Q8BT60 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13□□□□□ -0.33
Cpne3Q8BT60 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cpne3Q8BT60 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms