Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx1P63006 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx1P63006 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx1P63006 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx1P63006 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx1P63006 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx1P63006 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx1P63006 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx1P63006 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx1P63006 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx1P63006 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx1P63006 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx1P63006 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx1P63006 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx1P63006 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx1P63006 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx1P63006 Gm10156-201ENSMUST00000122364 462 ntBASIC13.2□□□□□ -0.3
Lhx1P63006 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx1P63006 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.2□□□□□ -0.3
Lhx1P63006 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.2□□□□□ -0.3
Lhx1P63006 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.2□□□□□ -0.3
Lhx1P63006 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.2□□□□□ -0.3
Lhx1P63006 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx1P63006 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx1P63006 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.2□□□□□ -0.3
Lhx1P63006 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx1P63006 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.2□□□□□ -0.3
Lhx1P63006 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.2□□□□□ -0.3
Lhx1P63006 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx1P63006 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx1P63006 Gm6091-201ENSMUST00000098307 165 ntBASIC13.2□□□□□ -0.3
Lhx1P63006 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx1P63006 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Lhx1P63006 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx1P63006 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx1P63006 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.2□□□□□ -0.3
Lhx1P63006 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Lhx1P63006 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx1P63006 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx1P63006 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lhx1P63006 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lhx1P63006 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lhx1P63006 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lhx1P63006 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
Lhx1P63006 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lhx1P63006 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Lhx1P63006 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lhx1P63006 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lhx1P63006 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lhx1P63006 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lhx1P63006 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lhx1P63006 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.19□□□□□ -0.3
Lhx1P63006 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lhx1P63006 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lhx1P63006 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lhx1P63006 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.19□□□□□ -0.3
Lhx1P63006 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.19□□□□□ -0.3
Lhx1P63006 Gm24644-201ENSMUST00000157114 139 ntBASIC13.19□□□□□ -0.3
Lhx1P63006 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lhx1P63006 Proscos-202ENSMUST00000178990 666 ntBASIC13.19□□□□□ -0.3
Lhx1P63006 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lhx1P63006 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.19□□□□□ -0.3
Lhx1P63006 Gm8598-201ENSMUST00000221184 836 ntBASIC13.19□□□□□ -0.3
Lhx1P63006 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lhx1P63006 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Lhx1P63006 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lhx1P63006 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lhx1P63006 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lhx1P63006 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.19□□□□□ -0.3
Lhx1P63006 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lhx1P63006 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Lhx1P63006 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Lhx1P63006 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.19□□□□□ -0.3
Lhx1P63006 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lhx1P63006 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lhx1P63006 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Lhx1P63006 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.19□□□□□ -0.3
Lhx1P63006 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lhx1P63006 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lhx1P63006 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Lhx1P63006 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lhx1P63006 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Lhx1P63006 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lhx1P63006 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.18□□□□□ -0.3
Lhx1P63006 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx1P63006 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.18□□□□□ -0.3
Lhx1P63006 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Lhx1P63006 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx1P63006 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx1P63006 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx1P63006 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx1P63006 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx1P63006 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Lhx1P63006 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx1P63006 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx1P63006 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx1P63006 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx1P63006 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx1P63006 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx1P63006 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms