Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1bP61025 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1bP61025 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1bP61025 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Cks1bP61025 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1bP61025 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1bP61025 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1bP61025 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1bP61025 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1bP61025 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1bP61025 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC9.63□□□□□ -0.87
Cks1bP61025 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1bP61025 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cks1bP61025 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC9.62□□□□□ -0.87
Cks1bP61025 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1bP61025 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1bP61025 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1bP61025 AC119177.1-201ENSMUST00000227647 1332 ntBASIC9.62□□□□□ -0.87
Cks1bP61025 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1bP61025 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1bP61025 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1bP61025 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1bP61025 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1bP61025 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1bP61025 AC164565.1-201ENSMUST00000217520 1484 ntBASIC9.62□□□□□ -0.87
Cks1bP61025 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC9.62□□□□□ -0.87
Cks1bP61025 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC9.62□□□□□ -0.87
Cks1bP61025 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1bP61025 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC9.62□□□□□ -0.87
Cks1bP61025 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1bP61025 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC9.62□□□□□ -0.87
Cks1bP61025 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC9.62□□□□□ -0.87
Cks1bP61025 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1bP61025 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Cks1bP61025 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Cks1bP61025 Gm4691-201ENSMUST00000182339 1000 ntBASIC9.62□□□□□ -0.87
Cks1bP61025 Gm2451-201ENSMUST00000199447 999 ntBASIC9.62□□□□□ -0.87
Cks1bP61025 Gm10290-201ENSMUST00000200451 999 ntBASIC9.62□□□□□ -0.87
Cks1bP61025 Olfr286-202ENSMUST00000205305 969 ntBASIC9.62□□□□□ -0.87
Cks1bP61025 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1bP61025 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC9.62□□□□□ -0.87
Cks1bP61025 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1bP61025 AC158538.1-201ENSMUST00000225870 294 ntBASIC9.62□□□□□ -0.87
Cks1bP61025 AC147366.1-201ENSMUST00000227671 852 ntBASIC9.62□□□□□ -0.87
Cks1bP61025 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1bP61025 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1bP61025 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1bP61025 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1bP61025 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1bP61025 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1bP61025 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC9.62□□□□□ -0.87
Cks1bP61025 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1bP61025 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1bP61025 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1bP61025 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1bP61025 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1bP61025 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Cks1bP61025 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1bP61025 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Cks1bP61025 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1bP61025 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1bP61025 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1bP61025 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1bP61025 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1bP61025 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1bP61025 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1bP61025 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1bP61025 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1bP61025 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1bP61025 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1bP61025 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Cks1bP61025 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1bP61025 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1bP61025 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1bP61025 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1bP61025 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1bP61025 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Cks1bP61025 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1bP61025 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1bP61025 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1bP61025 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1bP61025 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1bP61025 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1bP61025 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1bP61025 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC9.61□□□□□ -0.87
Cks1bP61025 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Cks1bP61025 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1bP61025 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1bP61025 Gm18262-201ENSMUST00000222560 1946 ntBASIC9.61□□□□□ -0.87
Cks1bP61025 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1bP61025 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1bP61025 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
Cks1bP61025 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1bP61025 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Cks1bP61025 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1bP61025 Gm8584-201ENSMUST00000171982 758 ntBASIC9.61□□□□□ -0.87
Cks1bP61025 Gm4899-201ENSMUST00000178708 719 ntBASIC9.61□□□□□ -0.87
Cks1bP61025 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC9.61□□□□□ -0.87
Cks1bP61025 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC9.61□□□□□ -0.87
Cks1bP61025 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms