Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-1P50220 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Nkx2-1P50220 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC11.15□□□□□ -0.62
Nkx2-1P50220 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Nkx2-1P50220 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-1P50220 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-1P50220 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-1P50220 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-1P50220 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-1P50220 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Nkx2-1P50220 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.15□□□□□ -0.62
Nkx2-1P50220 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.15□□□□□ -0.62
Nkx2-1P50220 Gm45751-201ENSMUST00000210185 1573 ntBASIC11.15□□□□□ -0.62
Nkx2-1P50220 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-1P50220 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-1P50220 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-1P50220 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nkx2-1P50220 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Nkx2-1P50220 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Nkx2-1P50220 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Nkx2-1P50220 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Nkx2-1P50220 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Nkx2-1P50220 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Nkx2-1P50220 BC001981-202ENSMUST00000191393 1545 ntBASIC11.14□□□□□ -0.63
Nkx2-1P50220 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-1P50220 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-1P50220 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-1P50220 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-1P50220 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.14□□□□□ -0.63
Nkx2-1P50220 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-1P50220 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-1P50220 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC11.14□□□□□ -0.63
Nkx2-1P50220 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-1P50220 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Nkx2-1P50220 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.14□□□□□ -0.63
Nkx2-1P50220 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-1P50220 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-1P50220 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-1P50220 Gm12017-201ENSMUST00000122453 1003 ntBASIC11.14□□□□□ -0.63
Nkx2-1P50220 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC11.14□□□□□ -0.63
Nkx2-1P50220 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-1P50220 Ighv8-7-201ENSMUST00000194349 297 ntBASIC11.14□□□□□ -0.63
Nkx2-1P50220 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC11.14□□□□□ -0.63
Nkx2-1P50220 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-1P50220 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-1P50220 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-1P50220 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-1P50220 Gpr146-202ENSMUST00000053120 1040 ntBASIC11.14□□□□□ -0.63
Nkx2-1P50220 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-1P50220 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-1P50220 Gm10175-201ENSMUST00000086013 645 ntBASIC11.14□□□□□ -0.63
Nkx2-1P50220 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-1P50220 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC11.14□□□□□ -0.63
Nkx2-1P50220 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-1P50220 AC114543.1-201ENSMUST00000226451 1558 ntBASIC11.14□□□□□ -0.63
Nkx2-1P50220 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-1P50220 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-1P50220 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.14□□□□□ -0.63
Nkx2-1P50220 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.14□□□□□ -0.63
Nkx2-1P50220 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-1P50220 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-1P50220 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-1P50220 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Nkx2-1P50220 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.14□□□□□ -0.63
Nkx2-1P50220 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.14□□□□□ -0.63
Nkx2-1P50220 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.14□□□□□ -0.63
Nkx2-1P50220 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Nkx2-1P50220 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.14□□□□□ -0.63
Nkx2-1P50220 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nkx2-1P50220 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-1P50220 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Nkx2-1P50220 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-1P50220 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-1P50220 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-1P50220 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Nkx2-1P50220 Gm42934-201ENSMUST00000196920 1345 ntBASIC11.13□□□□□ -0.63
Nkx2-1P50220 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.13□□□□□ -0.63
Nkx2-1P50220 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-1P50220 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-1P50220 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Nkx2-1P50220 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-1P50220 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-1P50220 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Nkx2-1P50220 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-1P50220 Gm13823-201ENSMUST00000119930 345 ntBASIC11.13□□□□□ -0.63
Nkx2-1P50220 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC11.13□□□□□ -0.63
Nkx2-1P50220 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC11.13□□□□□ -0.63
Nkx2-1P50220 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-1P50220 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-1P50220 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-1P50220 Gm27525-201ENSMUST00000184465 107 ntBASIC11.13□□□□□ -0.63
Nkx2-1P50220 Gm43073-201ENSMUST00000198200 1189 ntBASIC11.13□□□□□ -0.63
Nkx2-1P50220 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Nkx2-1P50220 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC11.13□□□□□ -0.63
Nkx2-1P50220 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nkx2-1P50220 Ndufaf2-202ENSMUST00000223734 556 ntBASIC11.13□□□□□ -0.63
Nkx2-1P50220 AC131187.1-201ENSMUST00000224567 809 ntBASIC11.13□□□□□ -0.63
Nkx2-1P50220 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.13□□□□□ -0.63
Nkx2-1P50220 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
Nkx2-1P50220 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms