Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3727J3QM54 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3727J3QM54 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3727J3QM54 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3727J3QM54 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3727J3QM54 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.41□□□□□ -0.58
Gm3727J3QM54 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3727J3QM54 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3727J3QM54 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3727J3QM54 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm3727J3QM54 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Gm3727J3QM54 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3727J3QM54 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.4□□□□□ -0.58
Gm3727J3QM54 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Gm3727J3QM54 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3727J3QM54 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Gm3727J3QM54 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Gm3727J3QM54 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3727J3QM54 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3727J3QM54 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3727J3QM54 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3727J3QM54 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Gm3727J3QM54 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.4□□□□□ -0.58
Gm3727J3QM54 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3727J3QM54 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.4□□□□□ -0.58
Gm3727J3QM54 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3727J3QM54 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.58
Gm3727J3QM54 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3727J3QM54 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3727J3QM54 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.4□□□□□ -0.58
Gm3727J3QM54 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC11.4□□□□□ -0.58
Gm3727J3QM54 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3727J3QM54 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3727J3QM54 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3727J3QM54 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Gm3727J3QM54 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC11.4□□□□□ -0.58
Gm3727J3QM54 Gm17807-201ENSMUST00000186869 298 ntBASIC11.4□□□□□ -0.58
Gm3727J3QM54 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC11.4□□□□□ -0.58
Gm3727J3QM54 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC11.4□□□□□ -0.58
Gm3727J3QM54 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC11.4□□□□□ -0.58
Gm3727J3QM54 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3727J3QM54 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3727J3QM54 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3727J3QM54 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3727J3QM54 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3727J3QM54 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3727J3QM54 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3727J3QM54 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3727J3QM54 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3727J3QM54 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3727J3QM54 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3727J3QM54 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3727J3QM54 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3727J3QM54 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3727J3QM54 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3727J3QM54 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3727J3QM54 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3727J3QM54 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Gm3727J3QM54 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Gm3727J3QM54 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Gm3727J3QM54 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Gm3727J3QM54 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Gm3727J3QM54 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Gm3727J3QM54 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
Gm3727J3QM54 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.4□□□□□ -0.59
Gm3727J3QM54 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Gm3727J3QM54 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Gm3727J3QM54 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Gm3727J3QM54 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.4□□□□□ -0.59
Gm3727J3QM54 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Gm3727J3QM54 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3727J3QM54 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3727J3QM54 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Gm3727J3QM54 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Gm3727J3QM54 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3727J3QM54 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3727J3QM54 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.39□□□□□ -0.59
Gm3727J3QM54 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3727J3QM54 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Gm3727J3QM54 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.39□□□□□ -0.59
Gm3727J3QM54 Matn2-203ENSMUST00000226766 3252 ntBASIC11.39□□□□□ -0.59
Gm3727J3QM54 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3727J3QM54 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3727J3QM54 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3727J3QM54 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3727J3QM54 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3727J3QM54 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3727J3QM54 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC11.39□□□□□ -0.59
Gm3727J3QM54 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Gm3727J3QM54 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3727J3QM54 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Gm3727J3QM54 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3727J3QM54 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.39□□□□□ -0.59
Gm3727J3QM54 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3727J3QM54 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3727J3QM54 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3727J3QM54 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3727J3QM54 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Gm3727J3QM54 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Gm3727J3QM54 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms