Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cpsf4lE9Q2N0 Grk6-205ENSMUST00000224653 2976 ntBASIC11.4□□□□□ -0.59
Cpsf4lE9Q2N0 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cpsf4lE9Q2N0 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cpsf4lE9Q2N0 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 Gm15429-201ENSMUST00000151268 798 ntBASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 Gm6983-201ENSMUST00000214912 628 ntBASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cpsf4lE9Q2N0 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4lE9Q2N0 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC11.38□□□□□ -0.59
Cpsf4lE9Q2N0 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.38□□□□□ -0.59
Cpsf4lE9Q2N0 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4lE9Q2N0 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.38□□□□□ -0.59
Cpsf4lE9Q2N0 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4lE9Q2N0 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4lE9Q2N0 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Cpsf4lE9Q2N0 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4lE9Q2N0 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.38□□□□□ -0.59
Cpsf4lE9Q2N0 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4lE9Q2N0 Gm15371-201ENSMUST00000117057 784 ntBASIC11.38□□□□□ -0.59
Cpsf4lE9Q2N0 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.38□□□□□ -0.59
Cpsf4lE9Q2N0 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.38□□□□□ -0.59
Cpsf4lE9Q2N0 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.38□□□□□ -0.59
Cpsf4lE9Q2N0 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.38□□□□□ -0.59
Cpsf4lE9Q2N0 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Cpsf4lE9Q2N0 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4lE9Q2N0 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4lE9Q2N0 Gm8515-201ENSMUST00000194852 576 ntBASIC11.38□□□□□ -0.59
Cpsf4lE9Q2N0 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.38□□□□□ -0.59
Cpsf4lE9Q2N0 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.38□□□□□ -0.59
Cpsf4lE9Q2N0 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4lE9Q2N0 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4lE9Q2N0 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4lE9Q2N0 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4lE9Q2N0 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4lE9Q2N0 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4lE9Q2N0 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.38□□□□□ -0.59
Cpsf4lE9Q2N0 Gm26315-201ENSMUST00000083890 321 ntBASIC11.38□□□□□ -0.59
Cpsf4lE9Q2N0 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4lE9Q2N0 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4lE9Q2N0 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.38□□□□□ -0.59
Cpsf4lE9Q2N0 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.38□□□□□ -0.59
Cpsf4lE9Q2N0 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4lE9Q2N0 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4lE9Q2N0 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.38□□□□□ -0.59
Cpsf4lE9Q2N0 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4lE9Q2N0 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4lE9Q2N0 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.38□□□□□ -0.59
Cpsf4lE9Q2N0 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4lE9Q2N0 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4lE9Q2N0 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cpsf4lE9Q2N0 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4lE9Q2N0 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Cpsf4lE9Q2N0 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4lE9Q2N0 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4lE9Q2N0 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Cpsf4lE9Q2N0 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4lE9Q2N0 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms