Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gm15770-201ENSMUST00000117498 584 ntBASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gm15920-201ENSMUST00000118998 402 ntBASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Mir8102-201ENSMUST00000184148 139 ntBASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gm20445-201ENSMUST00000061905 565 ntBASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gm10729-202ENSMUST00000193403 1375 ntBASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gm18905-201ENSMUST00000205454 928 ntBASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gm13859-201ENSMUST00000119936 1423 ntBASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms