Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb3S4R1G7 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb3S4R1G7 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb3S4R1G7 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb3S4R1G7 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb3S4R1G7 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb3S4R1G7 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb3S4R1G7 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb3S4R1G7 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb3S4R1G7 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
H2afb3S4R1G7 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb3S4R1G7 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb3S4R1G7 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb3S4R1G7 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.15□□□□□ -0.46
H2afb3S4R1G7 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.15□□□□□ -0.46
H2afb3S4R1G7 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
H2afb3S4R1G7 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
H2afb3S4R1G7 Gm27702-201ENSMUST00000184512 56 ntBASIC12.15□□□□□ -0.46
H2afb3S4R1G7 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb3S4R1G7 Gm8396-201ENSMUST00000057361 823 ntBASIC12.15□□□□□ -0.46
H2afb3S4R1G7 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb3S4R1G7 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
H2afb3S4R1G7 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
H2afb3S4R1G7 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb3S4R1G7 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
H2afb3S4R1G7 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb3S4R1G7 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
H2afb3S4R1G7 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.15□□□□□ -0.46
H2afb3S4R1G7 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb3S4R1G7 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb3S4R1G7 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb3S4R1G7 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb3S4R1G7 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H2afb3S4R1G7 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
H2afb3S4R1G7 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.15□□□□□ -0.47
H2afb3S4R1G7 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
H2afb3S4R1G7 Grk6-205ENSMUST00000224653 2976 ntBASIC12.15□□□□□ -0.47
H2afb3S4R1G7 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
H2afb3S4R1G7 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.15□□□□□ -0.47
H2afb3S4R1G7 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
H2afb3S4R1G7 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
H2afb3S4R1G7 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb3S4R1G7 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb3S4R1G7 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb3S4R1G7 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb3S4R1G7 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.14□□□□□ -0.47
H2afb3S4R1G7 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb3S4R1G7 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.14□□□□□ -0.47
H2afb3S4R1G7 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb3S4R1G7 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb3S4R1G7 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
H2afb3S4R1G7 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb3S4R1G7 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb3S4R1G7 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb3S4R1G7 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
H2afb3S4R1G7 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb3S4R1G7 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.14□□□□□ -0.47
H2afb3S4R1G7 Gm13385-201ENSMUST00000121089 220 ntBASIC12.14□□□□□ -0.47
H2afb3S4R1G7 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
H2afb3S4R1G7 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
H2afb3S4R1G7 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb3S4R1G7 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.14□□□□□ -0.47
H2afb3S4R1G7 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.14□□□□□ -0.47
H2afb3S4R1G7 Gm26308-201ENSMUST00000157768 69 ntBASIC12.14□□□□□ -0.47
H2afb3S4R1G7 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.14□□□□□ -0.47
H2afb3S4R1G7 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.14□□□□□ -0.47
H2afb3S4R1G7 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.14□□□□□ -0.47
H2afb3S4R1G7 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
H2afb3S4R1G7 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.14□□□□□ -0.47
H2afb3S4R1G7 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb3S4R1G7 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
H2afb3S4R1G7 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb3S4R1G7 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb3S4R1G7 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb3S4R1G7 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb3S4R1G7 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
H2afb3S4R1G7 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb3S4R1G7 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb3S4R1G7 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb3S4R1G7 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb3S4R1G7 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb3S4R1G7 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb3S4R1G7 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
H2afb3S4R1G7 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms