Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC15.77■□□□□ 0.12
Usp44Q8C2S0 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC15.77■□□□□ 0.12
Usp44Q8C2S0 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Usp44Q8C2S0 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Usp44Q8C2S0 AC134335.2-201ENSMUST00000227660 440 ntBASIC15.77■□□□□ 0.12
Usp44Q8C2S0 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Usp44Q8C2S0 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Usp44Q8C2S0 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.77■□□□□ 0.12
Usp44Q8C2S0 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Usp44Q8C2S0 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Usp44Q8C2S0 Gm5466-201ENSMUST00000119395 1890 ntBASIC15.77■□□□□ 0.11
Usp44Q8C2S0 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC15.77■□□□□ 0.11
Usp44Q8C2S0 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Usp44Q8C2S0 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Usp44Q8C2S0 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Usp44Q8C2S0 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Usp44Q8C2S0 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Usp44Q8C2S0 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Usp44Q8C2S0 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Usp44Q8C2S0 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Usp44Q8C2S0 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Usp44Q8C2S0 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Usp44Q8C2S0 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Usp44Q8C2S0 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Usp44Q8C2S0 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Usp44Q8C2S0 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Usp44Q8C2S0 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Usp44Q8C2S0 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC15.76■□□□□ 0.11
Usp44Q8C2S0 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Usp44Q8C2S0 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Usp44Q8C2S0 AL645783.1-201ENSMUST00000221416 1832 ntBASIC15.76■□□□□ 0.11
Usp44Q8C2S0 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Usp44Q8C2S0 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Usp44Q8C2S0 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Usp44Q8C2S0 Gm12928-201ENSMUST00000117115 573 ntBASIC15.76■□□□□ 0.11
Usp44Q8C2S0 Gm12138-201ENSMUST00000122180 951 ntBASIC15.76■□□□□ 0.11
Usp44Q8C2S0 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC15.76■□□□□ 0.11
Usp44Q8C2S0 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC15.76■□□□□ 0.11
Usp44Q8C2S0 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC15.76■□□□□ 0.11
Usp44Q8C2S0 Gm6745-201ENSMUST00000199216 526 ntBASIC15.76■□□□□ 0.11
Usp44Q8C2S0 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC15.76■□□□□ 0.11
Usp44Q8C2S0 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Usp44Q8C2S0 AC150560.1-201ENSMUST00000227731 1187 ntBASIC15.76■□□□□ 0.11
Usp44Q8C2S0 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Usp44Q8C2S0 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Usp44Q8C2S0 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Usp44Q8C2S0 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Usp44Q8C2S0 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Usp44Q8C2S0 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Usp44Q8C2S0 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Usp44Q8C2S0 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC15.76■□□□□ 0.11
Usp44Q8C2S0 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Usp44Q8C2S0 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC15.76■□□□□ 0.11
Usp44Q8C2S0 AC238940.1-201ENSMUST00000225106 1858 ntBASIC15.76■□□□□ 0.11
Usp44Q8C2S0 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Usp44Q8C2S0 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Usp44Q8C2S0 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Usp44Q8C2S0 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.75■□□□□ 0.11
Usp44Q8C2S0 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Usp44Q8C2S0 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Usp44Q8C2S0 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Usp44Q8C2S0 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Usp44Q8C2S0 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Usp44Q8C2S0 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Usp44Q8C2S0 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC15.75■□□□□ 0.11
Usp44Q8C2S0 Gm5303-201ENSMUST00000117943 1252 ntBASIC15.75■□□□□ 0.11
Usp44Q8C2S0 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC15.75■□□□□ 0.11
Usp44Q8C2S0 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Usp44Q8C2S0 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC15.75■□□□□ 0.11
Usp44Q8C2S0 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Usp44Q8C2S0 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Usp44Q8C2S0 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Usp44Q8C2S0 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Usp44Q8C2S0 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Usp44Q8C2S0 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Usp44Q8C2S0 Gm43423-201ENSMUST00000198390 2094 ntBASIC15.75■□□□□ 0.11
Usp44Q8C2S0 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Usp44Q8C2S0 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Usp44Q8C2S0 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Usp44Q8C2S0 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Usp44Q8C2S0 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Usp44Q8C2S0 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Usp44Q8C2S0 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Usp44Q8C2S0 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Usp44Q8C2S0 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC15.75■□□□□ 0.11
Usp44Q8C2S0 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Usp44Q8C2S0 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Usp44Q8C2S0 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Usp44Q8C2S0 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Usp44Q8C2S0 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Usp44Q8C2S0 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Usp44Q8C2S0 Gm6161-201ENSMUST00000121942 1102 ntBASIC15.74■□□□□ 0.11
Usp44Q8C2S0 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC15.74■□□□□ 0.11
Usp44Q8C2S0 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Usp44Q8C2S0 Gm6254-201ENSMUST00000168178 1072 ntBASIC15.74■□□□□ 0.11
Usp44Q8C2S0 Gm6153-201ENSMUST00000172004 1058 ntBASIC15.74■□□□□ 0.11
Usp44Q8C2S0 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Usp44Q8C2S0 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC15.74■□□□□ 0.11
Usp44Q8C2S0 Gm5641-202ENSMUST00000198699 1080 ntBASIC15.74■□□□□ 0.11
Usp44Q8C2S0 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms