Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smg1Q8BKX6 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Smg1Q8BKX6 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smg1Q8BKX6 Sybu-209ENSMUST00000228639 4113 ntBASIC11.13□□□□□ -0.63
Smg1Q8BKX6 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smg1Q8BKX6 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smg1Q8BKX6 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smg1Q8BKX6 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smg1Q8BKX6 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smg1Q8BKX6 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smg1Q8BKX6 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smg1Q8BKX6 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Smg1Q8BKX6 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Smg1Q8BKX6 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.13□□□□□ -0.63
Smg1Q8BKX6 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smg1Q8BKX6 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smg1Q8BKX6 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smg1Q8BKX6 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smg1Q8BKX6 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smg1Q8BKX6 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Smg1Q8BKX6 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC11.13□□□□□ -0.63
Smg1Q8BKX6 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.12□□□□□ -0.63
Smg1Q8BKX6 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Gm8894-201ENSMUST00000074642 666 ntBASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Gm9062-201ENSMUST00000117712 727 ntBASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smg1Q8BKX6 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Smg1Q8BKX6 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smg1Q8BKX6 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC11.11□□□□□ -0.63
Smg1Q8BKX6 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.11□□□□□ -0.63
Smg1Q8BKX6 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smg1Q8BKX6 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.11□□□□□ -0.63
Smg1Q8BKX6 Gm11801-201ENSMUST00000117807 746 ntBASIC11.11□□□□□ -0.63
Smg1Q8BKX6 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smg1Q8BKX6 Gm16372-201ENSMUST00000073088 450 ntBASIC11.11□□□□□ -0.63
Smg1Q8BKX6 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smg1Q8BKX6 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smg1Q8BKX6 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smg1Q8BKX6 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smg1Q8BKX6 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smg1Q8BKX6 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.11□□□□□ -0.63
Smg1Q8BKX6 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Smg1Q8BKX6 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smg1Q8BKX6 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smg1Q8BKX6 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smg1Q8BKX6 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.11□□□□□ -0.63
Smg1Q8BKX6 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.11□□□□□ -0.63
Smg1Q8BKX6 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC11.11□□□□□ -0.63
Smg1Q8BKX6 Gm6722-201ENSMUST00000221586 390 ntBASIC11.11□□□□□ -0.63
Smg1Q8BKX6 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.11□□□□□ -0.63
Smg1Q8BKX6 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smg1Q8BKX6 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smg1Q8BKX6 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smg1Q8BKX6 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smg1Q8BKX6 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC11.11□□□□□ -0.63
Smg1Q8BKX6 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.11□□□□□ -0.63
Smg1Q8BKX6 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smg1Q8BKX6 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms