Protein–RNA interactions for Protein: Q64337

Sqstm1, Sequestosome-1, mousemouse

Known RBP Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1Q64337 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sqstm1Q64337 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sqstm1Q64337 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sqstm1Q64337 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sqstm1Q64337 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.96□□□□□ -0.49
Sqstm1Q64337 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sqstm1Q64337 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sqstm1Q64337 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sqstm1Q64337 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sqstm1Q64337 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC11.96□□□□□ -0.49
Sqstm1Q64337 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sqstm1Q64337 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Sqstm1Q64337 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC11.96□□□□□ -0.49
Sqstm1Q64337 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Sqstm1Q64337 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC11.96□□□□□ -0.49
Sqstm1Q64337 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC11.96□□□□□ -0.49
Sqstm1Q64337 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.96□□□□□ -0.49
Sqstm1Q64337 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sqstm1Q64337 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Sqstm1Q64337 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Sqstm1Q64337 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sqstm1Q64337 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.96□□□□□ -0.5
Sqstm1Q64337 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sqstm1Q64337 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sqstm1Q64337 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sqstm1Q64337 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sqstm1Q64337 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
Sqstm1Q64337 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sqstm1Q64337 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC11.96□□□□□ -0.5
Sqstm1Q64337 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Sqstm1Q64337 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.96□□□□□ -0.5
Sqstm1Q64337 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Sqstm1Q64337 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.95□□□□□ -0.5
Sqstm1Q64337 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sqstm1Q64337 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC11.95□□□□□ -0.5
Sqstm1Q64337 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sqstm1Q64337 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sqstm1Q64337 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Sqstm1Q64337 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sqstm1Q64337 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.95□□□□□ -0.5
Sqstm1Q64337 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sqstm1Q64337 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Sqstm1Q64337 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sqstm1Q64337 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sqstm1Q64337 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sqstm1Q64337 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sqstm1Q64337 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.95□□□□□ -0.5
Sqstm1Q64337 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.95□□□□□ -0.5
Sqstm1Q64337 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC11.95□□□□□ -0.5
Sqstm1Q64337 Gm13036-201ENSMUST00000117799 748 ntBASIC11.95□□□□□ -0.5
Sqstm1Q64337 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sqstm1Q64337 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.95□□□□□ -0.5
Sqstm1Q64337 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sqstm1Q64337 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC11.95□□□□□ -0.5
Sqstm1Q64337 Gm9449-201ENSMUST00000207265 1011 ntBASIC11.95□□□□□ -0.5
Sqstm1Q64337 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC11.95□□□□□ -0.5
Sqstm1Q64337 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sqstm1Q64337 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.95□□□□□ -0.5
Sqstm1Q64337 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sqstm1Q64337 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sqstm1Q64337 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.95□□□□□ -0.5
Sqstm1Q64337 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.95□□□□□ -0.5
Sqstm1Q64337 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sqstm1Q64337 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sqstm1Q64337 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.95□□□□□ -0.5
Sqstm1Q64337 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.95□□□□□ -0.5
Sqstm1Q64337 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sqstm1Q64337 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sqstm1Q64337 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sqstm1Q64337 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sqstm1Q64337 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sqstm1Q64337 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.94□□□□□ -0.5
Sqstm1Q64337 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Sqstm1Q64337 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sqstm1Q64337 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sqstm1Q64337 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sqstm1Q64337 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sqstm1Q64337 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sqstm1Q64337 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sqstm1Q64337 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Sqstm1Q64337 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sqstm1Q64337 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sqstm1Q64337 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sqstm1Q64337 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC11.94□□□□□ -0.5
Sqstm1Q64337 Gm5177-201ENSMUST00000183092 997 ntBASIC11.94□□□□□ -0.5
Sqstm1Q64337 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sqstm1Q64337 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sqstm1Q64337 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sqstm1Q64337 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Sqstm1Q64337 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sqstm1Q64337 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sqstm1Q64337 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sqstm1Q64337 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sqstm1Q64337 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sqstm1Q64337 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sqstm1Q64337 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sqstm1Q64337 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sqstm1Q64337 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sqstm1Q64337 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sqstm1Q64337 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms