Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.17□□□□□ -0.3
Vsx2Q61412 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx2Q61412 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Vsx2Q61412 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx2Q61412 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx2Q61412 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx2Q61412 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx2Q61412 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx2Q61412 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx2Q61412 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx2Q61412 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx2Q61412 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx2Q61412 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Vsx2Q61412 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx2Q61412 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx2Q61412 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vsx2Q61412 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vsx2Q61412 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vsx2Q61412 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vsx2Q61412 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vsx2Q61412 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Vsx2Q61412 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Vsx2Q61412 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vsx2Q61412 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vsx2Q61412 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vsx2Q61412 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Vsx2Q61412 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vsx2Q61412 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vsx2Q61412 Gm6912-201ENSMUST00000117218 544 ntBASIC13.16□□□□□ -0.3
Vsx2Q61412 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
Vsx2Q61412 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.16□□□□□ -0.3
Vsx2Q61412 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vsx2Q61412 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Vsx2Q61412 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.16□□□□□ -0.3
Vsx2Q61412 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vsx2Q61412 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.16□□□□□ -0.3
Vsx2Q61412 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
Vsx2Q61412 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vsx2Q61412 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vsx2Q61412 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.16□□□□□ -0.3
Vsx2Q61412 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vsx2Q61412 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Vsx2Q61412 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vsx2Q61412 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vsx2Q61412 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vsx2Q61412 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Vsx2Q61412 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vsx2Q61412 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vsx2Q61412 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vsx2Q61412 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vsx2Q61412 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vsx2Q61412 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vsx2Q61412 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.15□□□□□ -0.3
Vsx2Q61412 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vsx2Q61412 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Vsx2Q61412 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vsx2Q61412 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Vsx2Q61412 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Vsx2Q61412 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vsx2Q61412 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Vsx2Q61412 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.15□□□□□ -0.3
Vsx2Q61412 Gm18905-201ENSMUST00000205454 928 ntBASIC13.15□□□□□ -0.3
Vsx2Q61412 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.15□□□□□ -0.3
Vsx2Q61412 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Vsx2Q61412 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.15□□□□□ -0.3
Vsx2Q61412 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vsx2Q61412 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vsx2Q61412 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vsx2Q61412 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vsx2Q61412 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vsx2Q61412 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vsx2Q61412 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vsx2Q61412 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vsx2Q61412 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Vsx2Q61412 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vsx2Q61412 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vsx2Q61412 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Vsx2Q61412 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vsx2Q61412 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vsx2Q61412 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vsx2Q61412 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.15□□□□□ -0.31
Vsx2Q61412 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx2Q61412 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx2Q61412 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx2Q61412 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Vsx2Q61412 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx2Q61412 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx2Q61412 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Vsx2Q61412 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx2Q61412 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx2Q61412 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.14□□□□□ -0.31
Vsx2Q61412 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Vsx2Q61412 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Vsx2Q61412 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx2Q61412 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.14□□□□□ -0.31
Vsx2Q61412 Gm28631-201ENSMUST00000190740 334 ntBASIC13.14□□□□□ -0.31
Vsx2Q61412 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx2Q61412 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx2Q61412 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vsx2Q61412 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms