Protein–RNA interactions for Protein: Q3ULP7

Ctsll3, Cathepsin L-like 3, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctsll3Q3ULP7 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.33□□□□□ -0.44
Ctsll3Q3ULP7 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ctsll3Q3ULP7 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctsll3Q3ULP7 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Ctsll3Q3ULP7 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctsll3Q3ULP7 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ctsll3Q3ULP7 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Ctsll3Q3ULP7 Gm14381-201ENSMUST00000122105 414 ntBASIC12.33□□□□□ -0.44
Ctsll3Q3ULP7 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.33□□□□□ -0.44
Ctsll3Q3ULP7 Gm6621-201ENSMUST00000193251 772 ntBASIC12.33□□□□□ -0.44
Ctsll3Q3ULP7 Gm37259-201ENSMUST00000193903 849 ntBASIC12.33□□□□□ -0.44
Ctsll3Q3ULP7 Gm38158-201ENSMUST00000194617 339 ntBASIC12.33□□□□□ -0.44
Ctsll3Q3ULP7 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.33□□□□□ -0.44
Ctsll3Q3ULP7 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ctsll3Q3ULP7 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.33□□□□□ -0.44
Ctsll3Q3ULP7 Gm8227-201ENSMUST00000223306 571 ntBASIC12.33□□□□□ -0.44
Ctsll3Q3ULP7 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctsll3Q3ULP7 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ctsll3Q3ULP7 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctsll3Q3ULP7 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.33□□□□□ -0.44
Ctsll3Q3ULP7 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctsll3Q3ULP7 Mir433-201ENSMUST00000093564 124 ntBASIC12.33□□□□□ -0.44
Ctsll3Q3ULP7 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.33□□□□□ -0.44
Ctsll3Q3ULP7 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctsll3Q3ULP7 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctsll3Q3ULP7 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctsll3Q3ULP7 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctsll3Q3ULP7 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctsll3Q3ULP7 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ctsll3Q3ULP7 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctsll3Q3ULP7 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ctsll3Q3ULP7 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ctsll3Q3ULP7 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ctsll3Q3ULP7 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ctsll3Q3ULP7 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctsll3Q3ULP7 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctsll3Q3ULP7 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctsll3Q3ULP7 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Gm2231-201ENSMUST00000125661 612 ntBASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Gm17376-201ENSMUST00000166016 84 ntBASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Gm26461-201ENSMUST00000175064 290 ntBASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Gm44069-201ENSMUST00000204898 506 ntBASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctsll3Q3ULP7 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ctsll3Q3ULP7 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ctsll3Q3ULP7 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ctsll3Q3ULP7 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ctsll3Q3ULP7 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ctsll3Q3ULP7 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ctsll3Q3ULP7 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ctsll3Q3ULP7 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ctsll3Q3ULP7 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ctsll3Q3ULP7 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ctsll3Q3ULP7 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
Ctsll3Q3ULP7 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ctsll3Q3ULP7 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ctsll3Q3ULP7 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ctsll3Q3ULP7 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms