Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sox3P53784 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Sox3P53784 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sox3P53784 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox3P53784 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox3P53784 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox3P53784 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox3P53784 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox3P53784 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox3P53784 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox3P53784 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox3P53784 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox3P53784 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox3P53784 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox3P53784 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox3P53784 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox3P53784 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox3P53784 Gm14723-201ENSMUST00000118686 215 ntBASIC12.94□□□□□ -0.34
Sox3P53784 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.94□□□□□ -0.34
Sox3P53784 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Sox3P53784 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox3P53784 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.94□□□□□ -0.34
Sox3P53784 Gm4857-201ENSMUST00000192718 785 ntBASIC12.94□□□□□ -0.34
Sox3P53784 Gm7287-201ENSMUST00000205267 602 ntBASIC12.94□□□□□ -0.34
Sox3P53784 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.94□□□□□ -0.34
Sox3P53784 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.94□□□□□ -0.34
Sox3P53784 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Sox3P53784 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox3P53784 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox3P53784 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Sox3P53784 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox3P53784 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox3P53784 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox3P53784 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox3P53784 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Sox3P53784 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox3P53784 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox3P53784 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Sox3P53784 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.94□□□□□ -0.34
Sox3P53784 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.94□□□□□ -0.34
Sox3P53784 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox3P53784 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.94□□□□□ -0.34
Sox3P53784 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox3P53784 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.94□□□□□ -0.34
Sox3P53784 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox3P53784 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox3P53784 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox3P53784 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox3P53784 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox3P53784 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Sox3P53784 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox3P53784 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox3P53784 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox3P53784 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox3P53784 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox3P53784 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox3P53784 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox3P53784 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox3P53784 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Sox3P53784 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox3P53784 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox3P53784 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.93□□□□□ -0.34
Sox3P53784 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Sox3P53784 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox3P53784 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox3P53784 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox3P53784 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox3P53784 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.93□□□□□ -0.34
Sox3P53784 Gm27514-201ENSMUST00000183692 110 ntBASIC12.93□□□□□ -0.34
Sox3P53784 Gm18054-201ENSMUST00000207539 555 ntBASIC12.93□□□□□ -0.34
Sox3P53784 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox3P53784 Gm6013-201ENSMUST00000212264 699 ntBASIC12.93□□□□□ -0.34
Sox3P53784 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.93□□□□□ -0.34
Sox3P53784 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.93□□□□□ -0.34
Sox3P53784 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox3P53784 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox3P53784 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Sox3P53784 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.93□□□□□ -0.34
Sox3P53784 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.93□□□□□ -0.34
Sox3P53784 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.93□□□□□ -0.34
Sox3P53784 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox3P53784 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox3P53784 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox3P53784 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox3P53784 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox3P53784 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox3P53784 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox3P53784 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox3P53784 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.93□□□□□ -0.34
Sox3P53784 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Sox3P53784 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Sox3P53784 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox3P53784 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox3P53784 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sox3P53784 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sox3P53784 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sox3P53784 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox3P53784 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox3P53784 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox3P53784 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms