Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim39Q9ESN2 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim39Q9ESN2 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim39Q9ESN2 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.68□□□□□ -0.38
Trim39Q9ESN2 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trim39Q9ESN2 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim39Q9ESN2 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim39Q9ESN2 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim39Q9ESN2 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim39Q9ESN2 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim39Q9ESN2 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.68□□□□□ -0.38
Trim39Q9ESN2 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim39Q9ESN2 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.68□□□□□ -0.38
Trim39Q9ESN2 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim39Q9ESN2 Pck2-205ENSMUST00000226352 2784 ntBASIC12.68□□□□□ -0.38
Trim39Q9ESN2 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim39Q9ESN2 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trim39Q9ESN2 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim39Q9ESN2 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim39Q9ESN2 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim39Q9ESN2 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim39Q9ESN2 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim39Q9ESN2 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trim39Q9ESN2 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim39Q9ESN2 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trim39Q9ESN2 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim39Q9ESN2 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Trim39Q9ESN2 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim39Q9ESN2 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim39Q9ESN2 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trim39Q9ESN2 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim39Q9ESN2 Gm28630-201ENSMUST00000187806 498 ntBASIC12.67□□□□□ -0.38
Trim39Q9ESN2 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim39Q9ESN2 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim39Q9ESN2 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim39Q9ESN2 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trim39Q9ESN2 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim39Q9ESN2 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim39Q9ESN2 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim39Q9ESN2 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim39Q9ESN2 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim39Q9ESN2 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trim39Q9ESN2 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim39Q9ESN2 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim39Q9ESN2 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim39Q9ESN2 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim39Q9ESN2 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trim39Q9ESN2 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trim39Q9ESN2 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim39Q9ESN2 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim39Q9ESN2 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim39Q9ESN2 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trim39Q9ESN2 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim39Q9ESN2 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim39Q9ESN2 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim39Q9ESN2 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim39Q9ESN2 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim39Q9ESN2 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim39Q9ESN2 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trim39Q9ESN2 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim39Q9ESN2 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trim39Q9ESN2 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim39Q9ESN2 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trim39Q9ESN2 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trim39Q9ESN2 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim39Q9ESN2 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim39Q9ESN2 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Trim39Q9ESN2 Gm13616-201ENSMUST00000120600 222 ntBASIC12.66□□□□□ -0.38
Trim39Q9ESN2 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim39Q9ESN2 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim39Q9ESN2 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim39Q9ESN2 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Trim39Q9ESN2 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.66□□□□□ -0.38
Trim39Q9ESN2 Gm16476-201ENSMUST00000221544 139 ntBASIC12.66□□□□□ -0.38
Trim39Q9ESN2 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim39Q9ESN2 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim39Q9ESN2 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.66□□□□□ -0.38
Trim39Q9ESN2 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim39Q9ESN2 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim39Q9ESN2 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim39Q9ESN2 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim39Q9ESN2 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim39Q9ESN2 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim39Q9ESN2 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim39Q9ESN2 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.66□□□□□ -0.38
Trim39Q9ESN2 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim39Q9ESN2 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim39Q9ESN2 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim39Q9ESN2 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim39Q9ESN2 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim39Q9ESN2 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim39Q9ESN2 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim39Q9ESN2 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim39Q9ESN2 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim39Q9ESN2 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.65□□□□□ -0.38
Trim39Q9ESN2 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim39Q9ESN2 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim39Q9ESN2 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trim39Q9ESN2 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim39Q9ESN2 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms