Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp2aQ9DB34 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp2aQ9DB34 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp2aQ9DB34 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Chmp2aQ9DB34 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp2aQ9DB34 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp2aQ9DB34 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp2aQ9DB34 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.11□□□□□ -0.15
Chmp2aQ9DB34 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2aQ9DB34 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2aQ9DB34 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.1□□□□□ -0.15
Chmp2aQ9DB34 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Chmp2aQ9DB34 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2aQ9DB34 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2aQ9DB34 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Chmp2aQ9DB34 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2aQ9DB34 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2aQ9DB34 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2aQ9DB34 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2aQ9DB34 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2aQ9DB34 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.1□□□□□ -0.15
Chmp2aQ9DB34 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.1□□□□□ -0.15
Chmp2aQ9DB34 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2aQ9DB34 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2aQ9DB34 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.1□□□□□ -0.15
Chmp2aQ9DB34 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.1□□□□□ -0.15
Chmp2aQ9DB34 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.1□□□□□ -0.15
Chmp2aQ9DB34 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.1□□□□□ -0.15
Chmp2aQ9DB34 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2aQ9DB34 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2aQ9DB34 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Chmp2aQ9DB34 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2aQ9DB34 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2aQ9DB34 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2aQ9DB34 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2aQ9DB34 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2aQ9DB34 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Chmp2aQ9DB34 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2aQ9DB34 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2aQ9DB34 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2aQ9DB34 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2aQ9DB34 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2aQ9DB34 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2aQ9DB34 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2aQ9DB34 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2aQ9DB34 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2aQ9DB34 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2aQ9DB34 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Chmp2aQ9DB34 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp2aQ9DB34 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp2aQ9DB34 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp2aQ9DB34 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Chmp2aQ9DB34 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Chmp2aQ9DB34 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp2aQ9DB34 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp2aQ9DB34 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.09□□□□□ -0.15
Chmp2aQ9DB34 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.09□□□□□ -0.15
Chmp2aQ9DB34 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp2aQ9DB34 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Chmp2aQ9DB34 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Chmp2aQ9DB34 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.09□□□□□ -0.15
Chmp2aQ9DB34 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.09□□□□□ -0.15
Chmp2aQ9DB34 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.09□□□□□ -0.15
Chmp2aQ9DB34 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Chmp2aQ9DB34 Gm6745-201ENSMUST00000199216 526 ntBASIC14.09□□□□□ -0.15
Chmp2aQ9DB34 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp2aQ9DB34 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Chmp2aQ9DB34 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.09□□□□□ -0.15
Chmp2aQ9DB34 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.09□□□□□ -0.15
Chmp2aQ9DB34 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp2aQ9DB34 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp2aQ9DB34 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp2aQ9DB34 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.09□□□□□ -0.15
Chmp2aQ9DB34 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp2aQ9DB34 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp2aQ9DB34 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp2aQ9DB34 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp2aQ9DB34 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp2aQ9DB34 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp2aQ9DB34 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Chmp2aQ9DB34 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chmp2aQ9DB34 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Chmp2aQ9DB34 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp2aQ9DB34 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp2aQ9DB34 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp2aQ9DB34 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp2aQ9DB34 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp2aQ9DB34 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Chmp2aQ9DB34 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp2aQ9DB34 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp2aQ9DB34 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp2aQ9DB34 Gm11524-201ENSMUST00000119349 807 ntBASIC14.08□□□□□ -0.16
Chmp2aQ9DB34 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.08□□□□□ -0.16
Chmp2aQ9DB34 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.08□□□□□ -0.16
Chmp2aQ9DB34 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Chmp2aQ9DB34 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.08□□□□□ -0.16
Chmp2aQ9DB34 Gm19078-201ENSMUST00000206311 727 ntBASIC14.08□□□□□ -0.16
Chmp2aQ9DB34 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chmp2aQ9DB34 Gm15823-201ENSMUST00000064305 670 ntBASIC14.08□□□□□ -0.16
Chmp2aQ9DB34 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms