Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.72■□□□□ 0.27
SYNPOQ8N3V7 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.72■□□□□ 0.27
SYNPOQ8N3V7 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYNPOQ8N3V7 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYNPOQ8N3V7 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYNPOQ8N3V7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYNPOQ8N3V7 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 AP006294.1-201ENST00000415407 339 ntBASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 AL080243.2-201ENST00000418783 582 ntBASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 GIMAP3P-201ENST00000495150 836 ntBASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 AC093004.1-201ENST00000508850 424 ntBASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 BANF1P1-201ENST00000553684 263 ntBASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SYNPOQ8N3V7 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
SYNPOQ8N3V7 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.26
SYNPOQ8N3V7 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SYNPOQ8N3V7 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 RN7SL618P-201ENST00000477850 296 ntBASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 IGHV3-71-201ENST00000523324 359 ntBASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SYNPOQ8N3V7 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms