Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.87□□□□□ -0.51
Lsm6P62313 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.87□□□□□ -0.51
Lsm6P62313 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm6P62313 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Lsm6P62313 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Lsm6P62313 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm6P62313 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm6P62313 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm6P62313 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm6P62313 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.87□□□□□ -0.51
Lsm6P62313 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm6P62313 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Lsm6P62313 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.87□□□□□ -0.51
Lsm6P62313 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm6P62313 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm6P62313 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm6P62313 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm6P62313 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm6P62313 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Lsm6P62313 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.86□□□□□ -0.51
Lsm6P62313 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.86□□□□□ -0.51
Lsm6P62313 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.86□□□□□ -0.51
Lsm6P62313 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.86□□□□□ -0.51
Lsm6P62313 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Lsm6P62313 Gm5161-201ENSMUST00000075243 853 ntBASIC11.86□□□□□ -0.51
Lsm6P62313 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Lsm6P62313 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.86□□□□□ -0.51
Lsm6P62313 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Lsm6P62313 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.86□□□□□ -0.51
Lsm6P62313 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.86□□□□□ -0.51
Lsm6P62313 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.86□□□□□ -0.51
Lsm6P62313 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm6P62313 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Lsm6P62313 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Lsm6P62313 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm6P62313 Acot6-202ENSMUST00000222921 3622 ntBASIC11.85□□□□□ -0.51
Lsm6P62313 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm6P62313 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm6P62313 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm6P62313 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm6P62313 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm6P62313 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.85□□□□□ -0.51
Lsm6P62313 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm6P62313 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm6P62313 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm6P62313 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm6P62313 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Lsm6P62313 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Lsm6P62313 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.85□□□□□ -0.51
Lsm6P62313 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.85□□□□□ -0.51
Lsm6P62313 Gm15321-201ENSMUST00000121290 288 ntBASIC11.85□□□□□ -0.51
Lsm6P62313 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.85□□□□□ -0.51
Lsm6P62313 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.85□□□□□ -0.51
Lsm6P62313 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.85□□□□□ -0.51
Lsm6P62313 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Lsm6P62313 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Lsm6P62313 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms