Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Pcdh9F8VPK8 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh9F8VPK8 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh9F8VPK8 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh9F8VPK8 Gm13223-201ENSMUST00000118609 747 ntBASIC13.87□□□□□ -0.19
Pcdh9F8VPK8 Gm13453-201ENSMUST00000118708 357 ntBASIC13.87□□□□□ -0.19
Pcdh9F8VPK8 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Pcdh9F8VPK8 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh9F8VPK8 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh9F8VPK8 Gm44872-201ENSMUST00000207864 420 ntBASIC13.87□□□□□ -0.19
Pcdh9F8VPK8 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.87□□□□□ -0.19
Pcdh9F8VPK8 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh9F8VPK8 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh9F8VPK8 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh9F8VPK8 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh9F8VPK8 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh9F8VPK8 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh9F8VPK8 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.87□□□□□ -0.19
Pcdh9F8VPK8 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh9F8VPK8 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh9F8VPK8 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh9F8VPK8 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh9F8VPK8 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.87□□□□□ -0.19
Pcdh9F8VPK8 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.87□□□□□ -0.19
Pcdh9F8VPK8 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh9F8VPK8 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh9F8VPK8 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.87□□□□□ -0.19
Pcdh9F8VPK8 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.86□□□□□ -0.19
Pcdh9F8VPK8 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh9F8VPK8 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh9F8VPK8 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh9F8VPK8 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh9F8VPK8 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh9F8VPK8 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh9F8VPK8 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Pcdh9F8VPK8 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh9F8VPK8 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh9F8VPK8 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh9F8VPK8 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh9F8VPK8 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh9F8VPK8 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh9F8VPK8 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh9F8VPK8 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh9F8VPK8 Gm15920-201ENSMUST00000118998 402 ntBASIC13.86□□□□□ -0.19
Pcdh9F8VPK8 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.86□□□□□ -0.19
Pcdh9F8VPK8 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.86□□□□□ -0.19
Pcdh9F8VPK8 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.86□□□□□ -0.19
Pcdh9F8VPK8 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.86□□□□□ -0.19
Pcdh9F8VPK8 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh9F8VPK8 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.86□□□□□ -0.19
Pcdh9F8VPK8 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.86□□□□□ -0.19
Pcdh9F8VPK8 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.86□□□□□ -0.19
Pcdh9F8VPK8 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh9F8VPK8 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh9F8VPK8 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.86□□□□□ -0.19
Pcdh9F8VPK8 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh9F8VPK8 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.86□□□□□ -0.19
Pcdh9F8VPK8 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh9F8VPK8 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh9F8VPK8 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh9F8VPK8 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh9F8VPK8 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh9F8VPK8 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh9F8VPK8 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh9F8VPK8 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh9F8VPK8 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Pcdh9F8VPK8 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh9F8VPK8 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdh9F8VPK8 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh9F8VPK8 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh9F8VPK8 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh9F8VPK8 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh9F8VPK8 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh9F8VPK8 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh9F8VPK8 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.85□□□□□ -0.19
Pcdh9F8VPK8 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Pcdh9F8VPK8 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Pcdh9F8VPK8 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh9F8VPK8 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Pcdh9F8VPK8 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.85□□□□□ -0.19
Pcdh9F8VPK8 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh9F8VPK8 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh9F8VPK8 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Pcdh9F8VPK8 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.85□□□□□ -0.19
Pcdh9F8VPK8 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh9F8VPK8 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Pcdh9F8VPK8 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Pcdh9F8VPK8 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.85□□□□□ -0.19
Pcdh9F8VPK8 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Pcdh9F8VPK8 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh9F8VPK8 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh9F8VPK8 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh9F8VPK8 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh9F8VPK8 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Pcdh9F8VPK8 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh9F8VPK8 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Pcdh9F8VPK8 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Pcdh9F8VPK8 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Pcdh9F8VPK8 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.85□□□□□ -0.19
Pcdh9F8VPK8 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 118.1 ms