Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Gm11127A7VMS2 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC11.98□□□□□ -0.49
Gm11127A7VMS2 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC11.98□□□□□ -0.49
Gm11127A7VMS2 Gm4995-201ENSMUST00000117247 432 ntBASIC11.98□□□□□ -0.49
Gm11127A7VMS2 Gm11594-201ENSMUST00000122313 162 ntBASIC11.98□□□□□ -0.49
Gm11127A7VMS2 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC11.98□□□□□ -0.49
Gm11127A7VMS2 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC11.98□□□□□ -0.49
Gm11127A7VMS2 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC11.98□□□□□ -0.49
Gm11127A7VMS2 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm11127A7VMS2 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm11127A7VMS2 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC11.98□□□□□ -0.49
Gm11127A7VMS2 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Gm11127A7VMS2 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC11.98□□□□□ -0.49
Gm11127A7VMS2 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11.98□□□□□ -0.49
Gm11127A7VMS2 AC158529.1-201ENSMUST00000223618 239 ntBASIC11.98□□□□□ -0.49
Gm11127A7VMS2 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.98□□□□□ -0.49
Gm11127A7VMS2 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm11127A7VMS2 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm11127A7VMS2 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.98□□□□□ -0.49
Gm11127A7VMS2 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm11127A7VMS2 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm11127A7VMS2 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Gm11127A7VMS2 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Gm11127A7VMS2 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm11127A7VMS2 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm11127A7VMS2 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm11127A7VMS2 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm11127A7VMS2 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm11127A7VMS2 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm11127A7VMS2 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Gm11127A7VMS2 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.97□□□□□ -0.49
Gm11127A7VMS2 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm11127A7VMS2 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm11127A7VMS2 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm11127A7VMS2 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm11127A7VMS2 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm11127A7VMS2 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm11127A7VMS2 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm11127A7VMS2 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Gm11127A7VMS2 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm11127A7VMS2 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm11127A7VMS2 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Gm11127A7VMS2 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC11.97□□□□□ -0.49
Gm11127A7VMS2 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Gm11127A7VMS2 Gm27494-201ENSMUST00000184735 189 ntBASIC11.97□□□□□ -0.49
Gm11127A7VMS2 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Gm11127A7VMS2 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Gm11127A7VMS2 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Gm11127A7VMS2 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Gm11127A7VMS2 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm11127A7VMS2 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Gm11127A7VMS2 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm11127A7VMS2 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm11127A7VMS2 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm11127A7VMS2 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Gm11127A7VMS2 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.97□□□□□ -0.49
Gm11127A7VMS2 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Gm11127A7VMS2 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Gm11127A7VMS2 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Gm11127A7VMS2 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Gm11127A7VMS2 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC11.96□□□□□ -0.49
Gm11127A7VMS2 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Gm11127A7VMS2 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm11127A7VMS2 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC11.96□□□□□ -0.49
Gm11127A7VMS2 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Gm11127A7VMS2 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm11127A7VMS2 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Gm11127A7VMS2 Gm13332-201ENSMUST00000120451 1398 ntBASIC11.96□□□□□ -0.49
Gm11127A7VMS2 AC115735.4-201ENSMUST00000227460 1944 ntBASIC11.96□□□□□ -0.49
Gm11127A7VMS2 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm11127A7VMS2 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm11127A7VMS2 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Gm11127A7VMS2 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Gm11127A7VMS2 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC11.96□□□□□ -0.49
Gm11127A7VMS2 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC11.96□□□□□ -0.49
Gm11127A7VMS2 Gm13365-201ENSMUST00000121188 973 ntBASIC11.96□□□□□ -0.49
Gm11127A7VMS2 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Gm11127A7VMS2 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Gm11127A7VMS2 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC11.96□□□□□ -0.49
Gm11127A7VMS2 Gm43514-201ENSMUST00000198852 424 ntBASIC11.96□□□□□ -0.49
Gm11127A7VMS2 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.96□□□□□ -0.49
Gm11127A7VMS2 AC124549.3-201ENSMUST00000225541 367 ntBASIC11.96□□□□□ -0.49
Gm11127A7VMS2 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Gm11127A7VMS2 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm11127A7VMS2 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Gm11127A7VMS2 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.96□□□□□ -0.49
Gm11127A7VMS2 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm11127A7VMS2 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm11127A7VMS2 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm11127A7VMS2 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm11127A7VMS2 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Gm11127A7VMS2 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Gm11127A7VMS2 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Gm11127A7VMS2 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Gm11127A7VMS2 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Gm11127A7VMS2 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Gm11127A7VMS2 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Gm11127A7VMS2 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Gm11127A7VMS2 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Gm11127A7VMS2 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms