Protein–RNA interactions for Protein: Q9WV80

Snx1, Sorting nexin-1, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx1Q9WV80 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Snx1Q9WV80 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.03□□□□□ -0.16
Snx1Q9WV80 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Snx1Q9WV80 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Snx1Q9WV80 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Snx1Q9WV80 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Snx1Q9WV80 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Snx1Q9WV80 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Snx1Q9WV80 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.03□□□□□ -0.16
Snx1Q9WV80 Gm45053-201ENSMUST00000206112 2499 ntBASIC14.03□□□□□ -0.16
Snx1Q9WV80 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Snx1Q9WV80 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Snx1Q9WV80 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Snx1Q9WV80 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Snx1Q9WV80 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Snx1Q9WV80 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.02□□□□□ -0.16
Snx1Q9WV80 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Snx1Q9WV80 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Snx1Q9WV80 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Snx1Q9WV80 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Snx1Q9WV80 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Snx1Q9WV80 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Snx1Q9WV80 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Snx1Q9WV80 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Snx1Q9WV80 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Snx1Q9WV80 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.16
Snx1Q9WV80 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Snx1Q9WV80 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Snx1Q9WV80 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Snx1Q9WV80 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Snx1Q9WV80 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Snx1Q9WV80 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Snx1Q9WV80 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Snx1Q9WV80 Gm18049-201ENSMUST00000208909 581 ntBASIC14.02□□□□□ -0.17
Snx1Q9WV80 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.02□□□□□ -0.17
Snx1Q9WV80 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Snx1Q9WV80 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Snx1Q9WV80 Mir497b-201ENSMUST00000093601 125 ntBASIC14.02□□□□□ -0.17
Snx1Q9WV80 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Snx1Q9WV80 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Snx1Q9WV80 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Snx1Q9WV80 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Snx1Q9WV80 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Snx1Q9WV80 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Snx1Q9WV80 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Snx1Q9WV80 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Snx1Q9WV80 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Snx1Q9WV80 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snx1Q9WV80 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snx1Q9WV80 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snx1Q9WV80 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snx1Q9WV80 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.01□□□□□ -0.17
Snx1Q9WV80 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snx1Q9WV80 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.01□□□□□ -0.17
Snx1Q9WV80 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snx1Q9WV80 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snx1Q9WV80 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snx1Q9WV80 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Snx1Q9WV80 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snx1Q9WV80 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Snx1Q9WV80 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snx1Q9WV80 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.01□□□□□ -0.17
Snx1Q9WV80 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Snx1Q9WV80 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Snx1Q9WV80 Gm27741-201ENSMUST00000185060 237 ntBASIC14.01□□□□□ -0.17
Snx1Q9WV80 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.01□□□□□ -0.17
Snx1Q9WV80 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snx1Q9WV80 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snx1Q9WV80 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snx1Q9WV80 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snx1Q9WV80 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.01□□□□□ -0.17
Snx1Q9WV80 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Snx1Q9WV80 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snx1Q9WV80 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snx1Q9WV80 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Snx1Q9WV80 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Snx1Q9WV80 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Snx1Q9WV80 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Snx1Q9WV80 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snx1Q9WV80 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snx1Q9WV80 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Snx1Q9WV80 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14□□□□□ -0.17
Snx1Q9WV80 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Snx1Q9WV80 Gm7899-201ENSMUST00000192935 1897 ntBASIC14□□□□□ -0.17
Snx1Q9WV80 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Snx1Q9WV80 Gm10327-201ENSMUST00000105222 1002 ntBASIC14□□□□□ -0.17
Snx1Q9WV80 Gm4913-201ENSMUST00000117075 1290 ntBASIC14□□□□□ -0.17
Snx1Q9WV80 Gm15467-201ENSMUST00000120582 445 ntBASIC14□□□□□ -0.17
Snx1Q9WV80 Gm13365-201ENSMUST00000121188 973 ntBASIC14□□□□□ -0.17
Snx1Q9WV80 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Snx1Q9WV80 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14□□□□□ -0.17
Snx1Q9WV80 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14□□□□□ -0.17
Snx1Q9WV80 Gm5069-202ENSMUST00000192714 1011 ntBASIC14□□□□□ -0.17
Snx1Q9WV80 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Snx1Q9WV80 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Snx1Q9WV80 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Snx1Q9WV80 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14□□□□□ -0.17
Snx1Q9WV80 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Snx1Q9WV80 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Snx1Q9WV80 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms