Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Sf3a3Q9D554 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.69□□□□□ -0.22
Sf3a3Q9D554 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3a3Q9D554 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3a3Q9D554 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3a3Q9D554 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Sf3a3Q9D554 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.69□□□□□ -0.22
Sf3a3Q9D554 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Sf3a3Q9D554 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3a3Q9D554 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Sf3a3Q9D554 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.69□□□□□ -0.22
Sf3a3Q9D554 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sf3a3Q9D554 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sf3a3Q9D554 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sf3a3Q9D554 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sf3a3Q9D554 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Sf3a3Q9D554 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sf3a3Q9D554 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sf3a3Q9D554 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.68□□□□□ -0.22
Sf3a3Q9D554 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sf3a3Q9D554 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Sf3a3Q9D554 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sf3a3Q9D554 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sf3a3Q9D554 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sf3a3Q9D554 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sf3a3Q9D554 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sf3a3Q9D554 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.68□□□□□ -0.22
Sf3a3Q9D554 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Sf3a3Q9D554 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13.68□□□□□ -0.22
Sf3a3Q9D554 Gm7977-201ENSMUST00000193787 748 ntBASIC13.68□□□□□ -0.22
Sf3a3Q9D554 Gm2272-201ENSMUST00000194903 582 ntBASIC13.68□□□□□ -0.22
Sf3a3Q9D554 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sf3a3Q9D554 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sf3a3Q9D554 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sf3a3Q9D554 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.68□□□□□ -0.22
Sf3a3Q9D554 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Sf3a3Q9D554 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sf3a3Q9D554 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Sf3a3Q9D554 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.68□□□□□ -0.22
Sf3a3Q9D554 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sf3a3Q9D554 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sf3a3Q9D554 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sf3a3Q9D554 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sf3a3Q9D554 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sf3a3Q9D554 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sf3a3Q9D554 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sf3a3Q9D554 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sf3a3Q9D554 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sf3a3Q9D554 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.68□□□□□ -0.22
Sf3a3Q9D554 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sf3a3Q9D554 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3a3Q9D554 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3a3Q9D554 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3a3Q9D554 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3a3Q9D554 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3a3Q9D554 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3a3Q9D554 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3a3Q9D554 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3a3Q9D554 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3a3Q9D554 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3a3Q9D554 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.67□□□□□ -0.22
Sf3a3Q9D554 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.67□□□□□ -0.22
Sf3a3Q9D554 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3a3Q9D554 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Sf3a3Q9D554 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Sf3a3Q9D554 Rubie-203ENSMUST00000227803 2430 ntBASIC13.67□□□□□ -0.22
Sf3a3Q9D554 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3a3Q9D554 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3a3Q9D554 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3a3Q9D554 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3a3Q9D554 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.67□□□□□ -0.22
Sf3a3Q9D554 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3a3Q9D554 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3a3Q9D554 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3a3Q9D554 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3a3Q9D554 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.67□□□□□ -0.22
Sf3a3Q9D554 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3a3Q9D554 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3a3Q9D554 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3a3Q9D554 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3a3Q9D554 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3a3Q9D554 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3a3Q9D554 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3a3Q9D554 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.67□□□□□ -0.22
Sf3a3Q9D554 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Sf3a3Q9D554 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.67□□□□□ -0.22
Sf3a3Q9D554 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3a3Q9D554 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3a3Q9D554 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3a3Q9D554 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3a3Q9D554 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.67□□□□□ -0.22
Sf3a3Q9D554 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3a3Q9D554 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3a3Q9D554 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3a3Q9D554 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Sf3a3Q9D554 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Sf3a3Q9D554 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3a3Q9D554 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3a3Q9D554 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3a3Q9D554 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms