Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.68□□□□□ -0.38
Sox17Q61473 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.68□□□□□ -0.38
Sox17Q61473 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Sox17Q61473 Mir125a-201ENSMUST00000083545 68 ntBASIC12.68□□□□□ -0.38
Sox17Q61473 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox17Q61473 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox17Q61473 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox17Q61473 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Sox17Q61473 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox17Q61473 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Sox17Q61473 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.68□□□□□ -0.38
Sox17Q61473 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.68□□□□□ -0.38
Sox17Q61473 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox17Q61473 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox17Q61473 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox17Q61473 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox17Q61473 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox17Q61473 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.68□□□□□ -0.38
Sox17Q61473 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.68□□□□□ -0.38
Sox17Q61473 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
Sox17Q61473 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Sox17Q61473 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox17Q61473 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Sox17Q61473 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox17Q61473 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sox17Q61473 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.67□□□□□ -0.38
Sox17Q61473 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sox17Q61473 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox17Q61473 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox17Q61473 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.67□□□□□ -0.38
Sox17Q61473 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox17Q61473 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox17Q61473 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox17Q61473 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.67□□□□□ -0.38
Sox17Q61473 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox17Q61473 Gm11025-201ENSMUST00000140773 466 ntBASIC12.67□□□□□ -0.38
Sox17Q61473 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC12.67□□□□□ -0.38
Sox17Q61473 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Sox17Q61473 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.67□□□□□ -0.38
Sox17Q61473 Gm27631-201ENSMUST00000184163 466 ntBASIC12.67□□□□□ -0.38
Sox17Q61473 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.67□□□□□ -0.38
Sox17Q61473 AA619741-201ENSMUST00000195095 646 ntBASIC12.67□□□□□ -0.38
Sox17Q61473 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Sox17Q61473 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sox17Q61473 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.67□□□□□ -0.38
Sox17Q61473 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Sox17Q61473 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Sox17Q61473 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox17Q61473 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox17Q61473 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sox17Q61473 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox17Q61473 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox17Q61473 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox17Q61473 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Sox17Q61473 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox17Q61473 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Sox17Q61473 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox17Q61473 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.67□□□□□ -0.38
Sox17Q61473 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox17Q61473 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox17Q61473 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox17Q61473 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sox17Q61473 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.66□□□□□ -0.38
Sox17Q61473 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sox17Q61473 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sox17Q61473 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.66□□□□□ -0.38
Sox17Q61473 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox17Q61473 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox17Q61473 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox17Q61473 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sox17Q61473 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox17Q61473 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.66□□□□□ -0.38
Sox17Q61473 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox17Q61473 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox17Q61473 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox17Q61473 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox17Q61473 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sox17Q61473 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox17Q61473 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox17Q61473 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.66□□□□□ -0.38
Sox17Q61473 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sox17Q61473 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.66□□□□□ -0.38
Sox17Q61473 Gm45453-201ENSMUST00000211758 853 ntBASIC12.66□□□□□ -0.38
Sox17Q61473 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sox17Q61473 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.66□□□□□ -0.38
Sox17Q61473 Psmb5-202ENSMUST00000227257 622 ntBASIC12.66□□□□□ -0.38
Sox17Q61473 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox17Q61473 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox17Q61473 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox17Q61473 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Sox17Q61473 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox17Q61473 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sox17Q61473 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox17Q61473 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox17Q61473 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox17Q61473 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox17Q61473 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox17Q61473 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox17Q61473 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sox17Q61473 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms