Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VcpQ01853 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VcpQ01853 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.45□□□□□ -0.1
VcpQ01853 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.45□□□□□ -0.1
VcpQ01853 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.45□□□□□ -0.1
VcpQ01853 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.45□□□□□ -0.1
VcpQ01853 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VcpQ01853 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.45□□□□□ -0.1
VcpQ01853 CT485787.1-201ENSMUST00000225617 968 ntBASIC14.45□□□□□ -0.1
VcpQ01853 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VcpQ01853 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VcpQ01853 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VcpQ01853 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VcpQ01853 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VcpQ01853 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VcpQ01853 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VcpQ01853 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.45□□□□□ -0.1
VcpQ01853 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VcpQ01853 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VcpQ01853 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VcpQ01853 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VcpQ01853 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VcpQ01853 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VcpQ01853 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VcpQ01853 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VcpQ01853 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
VcpQ01853 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.44□□□□□ -0.1
VcpQ01853 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VcpQ01853 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VcpQ01853 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VcpQ01853 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VcpQ01853 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VcpQ01853 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VcpQ01853 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VcpQ01853 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VcpQ01853 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VcpQ01853 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
VcpQ01853 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VcpQ01853 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.44□□□□□ -0.1
VcpQ01853 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VcpQ01853 Gm2445-201ENSMUST00000182798 989 ntBASIC14.44□□□□□ -0.1
VcpQ01853 Gm27731-201ENSMUST00000185192 107 ntBASIC14.44□□□□□ -0.1
VcpQ01853 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.44□□□□□ -0.1
VcpQ01853 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.44□□□□□ -0.1
VcpQ01853 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
VcpQ01853 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
VcpQ01853 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
VcpQ01853 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
VcpQ01853 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
VcpQ01853 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VcpQ01853 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VcpQ01853 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
VcpQ01853 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
VcpQ01853 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
VcpQ01853 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VcpQ01853 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VcpQ01853 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
VcpQ01853 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VcpQ01853 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VcpQ01853 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VcpQ01853 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VcpQ01853 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.43□□□□□ -0.1
VcpQ01853 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.43□□□□□ -0.1
VcpQ01853 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
VcpQ01853 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
VcpQ01853 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VcpQ01853 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VcpQ01853 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VcpQ01853 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
VcpQ01853 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VcpQ01853 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.43□□□□□ -0.1
VcpQ01853 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VcpQ01853 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
VcpQ01853 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VcpQ01853 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
VcpQ01853 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VcpQ01853 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VcpQ01853 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VcpQ01853 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VcpQ01853 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.43□□□□□ -0.1
VcpQ01853 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
VcpQ01853 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
VcpQ01853 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
VcpQ01853 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.43□□□□□ -0.1
VcpQ01853 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VcpQ01853 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
VcpQ01853 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
VcpQ01853 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VcpQ01853 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VcpQ01853 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VcpQ01853 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VcpQ01853 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VcpQ01853 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VcpQ01853 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VcpQ01853 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
VcpQ01853 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VcpQ01853 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VcpQ01853 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VcpQ01853 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VcpQ01853 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms