Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nup43P59235 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nup43P59235 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nup43P59235 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nup43P59235 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup43P59235 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nup43P59235 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.79□□□□□ -0.36
Nup43P59235 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nup43P59235 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Nup43P59235 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nup43P59235 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup43P59235 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nup43P59235 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup43P59235 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nup43P59235 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup43P59235 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup43P59235 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.79□□□□□ -0.36
Nup43P59235 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Nup43P59235 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup43P59235 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup43P59235 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup43P59235 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nup43P59235 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Nup43P59235 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.79□□□□□ -0.36
Nup43P59235 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.79□□□□□ -0.36
Nup43P59235 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.79□□□□□ -0.36
Nup43P59235 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nup43P59235 Gm18018-201ENSMUST00000198273 408 ntBASIC12.79□□□□□ -0.36
Nup43P59235 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup43P59235 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.79□□□□□ -0.36
Nup43P59235 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.79□□□□□ -0.36
Nup43P59235 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nup43P59235 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.79□□□□□ -0.36
Nup43P59235 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup43P59235 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nup43P59235 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup43P59235 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup43P59235 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nup43P59235 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nup43P59235 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup43P59235 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Nup43P59235 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup43P59235 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nup43P59235 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup43P59235 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nup43P59235 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup43P59235 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup43P59235 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup43P59235 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.78□□□□□ -0.36
Nup43P59235 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup43P59235 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nup43P59235 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nup43P59235 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup43P59235 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Nup43P59235 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.78□□□□□ -0.36
Nup43P59235 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup43P59235 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup43P59235 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup43P59235 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup43P59235 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup43P59235 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup43P59235 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.78□□□□□ -0.36
Nup43P59235 Mir7654-201ENSMUST00000185082 70 ntBASIC12.78□□□□□ -0.36
Nup43P59235 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nup43P59235 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Nup43P59235 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup43P59235 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup43P59235 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nup43P59235 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nup43P59235 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup43P59235 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup43P59235 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup43P59235 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nup43P59235 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nup43P59235 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup43P59235 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nup43P59235 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nup43P59235 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nup43P59235 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Nup43P59235 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Nup43P59235 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Nup43P59235 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup43P59235 Gm14928-201ENSMUST00000120198 477 ntBASIC12.77□□□□□ -0.37
Nup43P59235 Gm12091-201ENSMUST00000146791 830 ntBASIC12.77□□□□□ -0.37
Nup43P59235 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup43P59235 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Nup43P59235 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup43P59235 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nup43P59235 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nup43P59235 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.77□□□□□ -0.37
Nup43P59235 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.77□□□□□ -0.37
Nup43P59235 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup43P59235 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup43P59235 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup43P59235 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup43P59235 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nup43P59235 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.77□□□□□ -0.37
Nup43P59235 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup43P59235 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup43P59235 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms