Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.02■□□□□ 0.32
HMGA1P17096 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HMGA1P17096 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMGA1P17096 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HMGA1P17096 AC010336.2-201ENST00000564226 506 ntBASIC17.02■□□□□ 0.32
HMGA1P17096 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
HMGA1P17096 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
HMGA1P17096 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMGA1P17096 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
HMGA1P17096 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
HMGA1P17096 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.02■□□□□ 0.31
HMGA1P17096 AC022211.2-201ENST00000585075 2527 ntBASIC17.02■□□□□ 0.31
HMGA1P17096 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.02■□□□□ 0.31
HMGA1P17096 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HMGA1P17096 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.02■□□□□ 0.31
HMGA1P17096 KRT8P12-202ENST00000472924 1397 ntBASIC17.02■□□□□ 0.31
HMGA1P17096 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.01■□□□□ 0.31
HMGA1P17096 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGA1P17096 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGA1P17096 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGA1P17096 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
HMGA1P17096 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
HMGA1P17096 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
HMGA1P17096 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGA1P17096 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.01■□□□□ 0.31
HMGA1P17096 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGA1P17096 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HMGA1P17096 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.01■□□□□ 0.31
HMGA1P17096 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.01■□□□□ 0.31
HMGA1P17096 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.01■□□□□ 0.31
HMGA1P17096 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.01■□□□□ 0.31
HMGA1P17096 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.01■□□□□ 0.31
HMGA1P17096 AC026979.3-201ENST00000607315 403 ntBASIC17.01■□□□□ 0.31
HMGA1P17096 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.01■□□□□ 0.31
HMGA1P17096 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
HMGA1P17096 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
HMGA1P17096 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGA1P17096 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGA1P17096 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.01■□□□□ 0.31
HMGA1P17096 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
HMGA1P17096 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.01■□□□□ 0.31
HMGA1P17096 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGA1P17096 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGA1P17096 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGA1P17096 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGA1P17096 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGA1P17096 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
HMGA1P17096 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HMGA1P17096 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HMGA1P17096 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17■□□□□ 0.31
HMGA1P17096 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGA1P17096 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
HMGA1P17096 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HMGA1P17096 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGA1P17096 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGA1P17096 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17■□□□□ 0.31
HMGA1P17096 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGA1P17096 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17■□□□□ 0.31
HMGA1P17096 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGA1P17096 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17■□□□□ 0.31
HMGA1P17096 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17■□□□□ 0.31
HMGA1P17096 AC106886.4-201ENST00000623557 2502 ntBASIC17■□□□□ 0.31
HMGA1P17096 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGA1P17096 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGA1P17096 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGA1P17096 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGA1P17096 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGA1P17096 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
HMGA1P17096 PIN1P1-201ENST00000412108 996 ntBASIC17■□□□□ 0.31
HMGA1P17096 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
HMGA1P17096 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17■□□□□ 0.31
HMGA1P17096 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGA1P17096 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17■□□□□ 0.31
HMGA1P17096 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17■□□□□ 0.31
HMGA1P17096 SPDYE22P-201ENST00000582158 798 ntBASIC17■□□□□ 0.31
HMGA1P17096 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17■□□□□ 0.31
HMGA1P17096 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
HMGA1P17096 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17■□□□□ 0.31
HMGA1P17096 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17■□□□□ 0.31
HMGA1P17096 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
HMGA1P17096 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17■□□□□ 0.31
HMGA1P17096 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17■□□□□ 0.31
HMGA1P17096 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17■□□□□ 0.31
HMGA1P17096 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17■□□□□ 0.31
HMGA1P17096 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGA1P17096 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGA1P17096 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGA1P17096 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.99■□□□□ 0.31
HMGA1P17096 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HMGA1P17096 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGA1P17096 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGA1P17096 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.99■□□□□ 0.31
HMGA1P17096 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGA1P17096 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGA1P17096 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGA1P17096 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
HMGA1P17096 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
HMGA1P17096 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.99■□□□□ 0.31
HMGA1P17096 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGA1P17096 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms