Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Polr2aP08775 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Polr2aP08775 Gm7789-202ENSMUST00000211273 1400 ntBASIC15.16■□□□□ 0.02
Polr2aP08775 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Polr2aP08775 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Polr2aP08775 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Polr2aP08775 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Polr2aP08775 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Polr2aP08775 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC15.15■□□□□ 0.02
Polr2aP08775 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Polr2aP08775 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.15■□□□□ 0.02
Polr2aP08775 Gm14371-201ENSMUST00000138925 1518 ntBASIC15.15■□□□□ 0.02
Polr2aP08775 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Polr2aP08775 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Polr2aP08775 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Polr2aP08775 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Polr2aP08775 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Polr2aP08775 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC15.15■□□□□ 0.02
Polr2aP08775 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC15.15■□□□□ 0.02
Polr2aP08775 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Polr2aP08775 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC15.15■□□□□ 0.02
Polr2aP08775 Gm26361-201ENSMUST00000158868 186 ntBASIC15.15■□□□□ 0.02
Polr2aP08775 Gm9550-201ENSMUST00000161130 862 ntBASIC15.15■□□□□ 0.02
Polr2aP08775 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Polr2aP08775 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC15.15■□□□□ 0.02
Polr2aP08775 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Polr2aP08775 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC15.15■□□□□ 0.02
Polr2aP08775 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Polr2aP08775 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Polr2aP08775 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Polr2aP08775 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Polr2aP08775 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Polr2aP08775 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC15.14■□□□□ 0.01
Polr2aP08775 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.14■□□□□ 0.01
Polr2aP08775 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Polr2aP08775 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
Polr2aP08775 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Polr2aP08775 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Polr2aP08775 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Polr2aP08775 Gm43908-201ENSMUST00000205074 1472 ntBASIC15.14■□□□□ 0.01
Polr2aP08775 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Polr2aP08775 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Polr2aP08775 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Polr2aP08775 Gm14704-201ENSMUST00000120300 874 ntBASIC15.14■□□□□ 0.01
Polr2aP08775 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC15.14■□□□□ 0.01
Polr2aP08775 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC15.14■□□□□ 0.01
Polr2aP08775 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Polr2aP08775 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Polr2aP08775 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Polr2aP08775 Gm5466-201ENSMUST00000119395 1890 ntBASIC15.14■□□□□ 0.01
Polr2aP08775 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.14■□□□□ 0.01
Polr2aP08775 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Polr2aP08775 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Polr2aP08775 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Polr2aP08775 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Polr2aP08775 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Polr2aP08775 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Polr2aP08775 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC15.13■□□□□ 0.01
Polr2aP08775 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Polr2aP08775 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Polr2aP08775 Gm6963-201ENSMUST00000147879 379 ntBASIC15.13■□□□□ 0.01
Polr2aP08775 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Polr2aP08775 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Polr2aP08775 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Polr2aP08775 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.13■□□□□ 0.01
Polr2aP08775 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC15.13■□□□□ 0.01
Polr2aP08775 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Polr2aP08775 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC15.13■□□□□ 0.01
Polr2aP08775 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Polr2aP08775 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Polr2aP08775 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Polr2aP08775 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Polr2aP08775 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Polr2aP08775 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Polr2aP08775 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Polr2aP08775 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
Polr2aP08775 Gm45118-201ENSMUST00000208928 825 ntBASIC15.13■□□□□ 0.01
Polr2aP08775 AC167013.1-201ENSMUST00000228592 202 ntBASIC15.13■□□□□ 0.01
Polr2aP08775 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Polr2aP08775 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC15.13■□□□□ 0.01
Polr2aP08775 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Polr2aP08775 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC15.12■□□□□ 0.01
Polr2aP08775 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC15.12■□□□□ 0.01
Polr2aP08775 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Polr2aP08775 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Polr2aP08775 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.12■□□□□ 0.01
Polr2aP08775 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Polr2aP08775 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Polr2aP08775 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Polr2aP08775 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Polr2aP08775 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.12■□□□□ 0.01
Polr2aP08775 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Polr2aP08775 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Polr2aP08775 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Polr2aP08775 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Polr2aP08775 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Polr2aP08775 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Polr2aP08775 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Polr2aP08775 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Polr2aP08775 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms