Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.75■□□□□ 0.27
HLA-DQB2P05538 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DQB2P05538 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.75■□□□□ 0.27
HLA-DQB2P05538 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
HLA-DQB2P05538 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DQB2P05538 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
HLA-DQB2P05538 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DQB2P05538 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.75■□□□□ 0.27
HLA-DQB2P05538 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
HLA-DQB2P05538 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.75■□□□□ 0.27
HLA-DQB2P05538 AL355306.1-201ENST00000415580 579 ntBASIC16.75■□□□□ 0.27
HLA-DQB2P05538 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DQB2P05538 RARRES2P8-201ENST00000566335 367 ntBASIC16.75■□□□□ 0.27
HLA-DQB2P05538 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DQB2P05538 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DQB2P05538 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DQB2P05538 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DQB2P05538 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
HLA-DQB2P05538 AC005622.1-201ENST00000636801 1703 ntBASIC16.75■□□□□ 0.27
HLA-DQB2P05538 REXO1L8P-201ENST00000604378 1897 ntBASIC16.75■□□□□ 0.27
HLA-DQB2P05538 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DQB2P05538 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DQB2P05538 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.75■□□□□ 0.27
HLA-DQB2P05538 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
HLA-DQB2P05538 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DQB2P05538 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DQB2P05538 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.75■□□□□ 0.27
HLA-DQB2P05538 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DQB2P05538 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
HLA-DQB2P05538 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DQB2P05538 DOC2GP-204ENST00000639052 2548 ntBASIC16.74■□□□□ 0.27
HLA-DQB2P05538 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
HLA-DQB2P05538 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
HLA-DQB2P05538 MTHFR-217ENST00000641820 1569 ntBASIC16.74■□□□□ 0.27
HLA-DQB2P05538 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.74■□□□□ 0.27
HLA-DQB2P05538 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DQB2P05538 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
HLA-DQB2P05538 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DQB2P05538 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DQB2P05538 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
HLA-DQB2P05538 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DQB2P05538 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.74■□□□□ 0.27
HLA-DQB2P05538 ADH5P3-201ENST00000433842 1137 ntBASIC16.74■□□□□ 0.27
HLA-DQB2P05538 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.74■□□□□ 0.27
HLA-DQB2P05538 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.74■□□□□ 0.27
HLA-DQB2P05538 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.74■□□□□ 0.27
HLA-DQB2P05538 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
HLA-DQB2P05538 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.74■□□□□ 0.27
HLA-DQB2P05538 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.74■□□□□ 0.27
HLA-DQB2P05538 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DQB2P05538 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
HLA-DQB2P05538 MTDHP5-201ENST00000598980 586 ntBASIC16.74■□□□□ 0.27
HLA-DQB2P05538 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
HLA-DQB2P05538 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DQB2P05538 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.74■□□□□ 0.27
HLA-DQB2P05538 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DQB2P05538 C20orf181-201ENST00000623918 480 ntBASIC16.74■□□□□ 0.27
HLA-DQB2P05538 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
HLA-DQB2P05538 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
HLA-DQB2P05538 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.74■□□□□ 0.27
HLA-DQB2P05538 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.74■□□□□ 0.27
HLA-DQB2P05538 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DQB2P05538 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DQB2P05538 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DQB2P05538 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.74■□□□□ 0.27
HLA-DQB2P05538 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
HLA-DQB2P05538 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
HLA-DQB2P05538 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
HLA-DQB2P05538 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DQB2P05538 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.73■□□□□ 0.27
HLA-DQB2P05538 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DQB2P05538 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DQB2P05538 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DQB2P05538 TNRC18P3-201ENST00000441896 2691 ntBASIC16.73■□□□□ 0.27
HLA-DQB2P05538 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DQB2P05538 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
HLA-DQB2P05538 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DQB2P05538 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.73■□□□□ 0.27
HLA-DQB2P05538 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DQB2P05538 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
HLA-DQB2P05538 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DQB2P05538 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.73■□□□□ 0.27
HLA-DQB2P05538 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.73■□□□□ 0.27
HLA-DQB2P05538 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
HLA-DQB2P05538 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DQB2P05538 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DQB2P05538 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DQB2P05538 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DQB2P05538 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.73■□□□□ 0.27
HLA-DQB2P05538 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DQB2P05538 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
HLA-DQB2P05538 AC093724.1-201ENST00000448659 1027 ntBASIC16.73■□□□□ 0.27
HLA-DQB2P05538 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DQB2P05538 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.73■□□□□ 0.27
HLA-DQB2P05538 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.73■□□□□ 0.27
HLA-DQB2P05538 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.73■□□□□ 0.27
HLA-DQB2P05538 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.73■□□□□ 0.27
HLA-DQB2P05538 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.73■□□□□ 0.27
HLA-DQB2P05538 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.73■□□□□ 0.27
HLA-DQB2P05538 AC073439.1-201ENST00000624121 1774 ntBASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms