Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Dnmt3aO88508 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Dnmt3aO88508 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Dnmt3aO88508 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Dnmt3aO88508 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Dnmt3aO88508 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Dnmt3aO88508 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Dnmt3aO88508 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.66□□□□□ -0.22
Dnmt3aO88508 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Dnmt3aO88508 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Dnmt3aO88508 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Dnmt3aO88508 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dnmt3aO88508 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dnmt3aO88508 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dnmt3aO88508 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dnmt3aO88508 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dnmt3aO88508 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dnmt3aO88508 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Dnmt3aO88508 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dnmt3aO88508 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dnmt3aO88508 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dnmt3aO88508 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.65□□□□□ -0.22
Dnmt3aO88508 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Dnmt3aO88508 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dnmt3aO88508 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.65□□□□□ -0.22
Dnmt3aO88508 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Dnmt3aO88508 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Dnmt3aO88508 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Dnmt3aO88508 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Dnmt3aO88508 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.65□□□□□ -0.22
Dnmt3aO88508 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Dnmt3aO88508 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.65□□□□□ -0.22
Dnmt3aO88508 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dnmt3aO88508 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Dnmt3aO88508 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Dnmt3aO88508 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dnmt3aO88508 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dnmt3aO88508 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.65□□□□□ -0.22
Dnmt3aO88508 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dnmt3aO88508 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Dnmt3aO88508 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Dnmt3aO88508 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dnmt3aO88508 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Dnmt3aO88508 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dnmt3aO88508 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dnmt3aO88508 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dnmt3aO88508 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.65□□□□□ -0.22
Dnmt3aO88508 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Dnmt3aO88508 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Dnmt3aO88508 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Dnmt3aO88508 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Dnmt3aO88508 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Dnmt3aO88508 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Dnmt3aO88508 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Dnmt3aO88508 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Dnmt3aO88508 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Dnmt3aO88508 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.64□□□□□ -0.23
Dnmt3aO88508 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Dnmt3aO88508 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Dnmt3aO88508 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Dnmt3aO88508 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Dnmt3aO88508 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Dnmt3aO88508 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Dnmt3aO88508 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Dnmt3aO88508 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Dnmt3aO88508 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
Dnmt3aO88508 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Dnmt3aO88508 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.64□□□□□ -0.23
Dnmt3aO88508 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.64□□□□□ -0.23
Dnmt3aO88508 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Dnmt3aO88508 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Dnmt3aO88508 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Dnmt3aO88508 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Dnmt3aO88508 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Dnmt3aO88508 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Dnmt3aO88508 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Dnmt3aO88508 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Dnmt3aO88508 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Dnmt3aO88508 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Dnmt3aO88508 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Dnmt3aO88508 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Dnmt3aO88508 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.64□□□□□ -0.23
Dnmt3aO88508 Gm38376-201ENSMUST00000195493 2253 ntBASIC13.64□□□□□ -0.23
Dnmt3aO88508 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Dnmt3aO88508 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.64□□□□□ -0.23
Dnmt3aO88508 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.64□□□□□ -0.23
Dnmt3aO88508 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Dnmt3aO88508 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Dnmt3aO88508 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Dnmt3aO88508 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Dnmt3aO88508 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Dnmt3aO88508 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Dnmt3aO88508 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Dnmt3aO88508 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Dnmt3aO88508 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Dnmt3aO88508 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Dnmt3aO88508 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Dnmt3aO88508 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Dnmt3aO88508 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Dnmt3aO88508 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms