Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Clip3B9EHT4 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clip3B9EHT4 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clip3B9EHT4 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clip3B9EHT4 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clip3B9EHT4 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clip3B9EHT4 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clip3B9EHT4 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clip3B9EHT4 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clip3B9EHT4 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clip3B9EHT4 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clip3B9EHT4 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Clip3B9EHT4 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clip3B9EHT4 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clip3B9EHT4 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Clip3B9EHT4 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Clip3B9EHT4 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clip3B9EHT4 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clip3B9EHT4 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clip3B9EHT4 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.17□□□□□ -0.3
Clip3B9EHT4 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Clip3B9EHT4 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clip3B9EHT4 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.17□□□□□ -0.3
Clip3B9EHT4 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clip3B9EHT4 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clip3B9EHT4 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Clip3B9EHT4 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clip3B9EHT4 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Clip3B9EHT4 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.17□□□□□ -0.3
Clip3B9EHT4 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clip3B9EHT4 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
Clip3B9EHT4 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clip3B9EHT4 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clip3B9EHT4 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clip3B9EHT4 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Clip3B9EHT4 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.16□□□□□ -0.3
Clip3B9EHT4 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Clip3B9EHT4 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clip3B9EHT4 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.16□□□□□ -0.3
Clip3B9EHT4 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.16□□□□□ -0.3
Clip3B9EHT4 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clip3B9EHT4 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clip3B9EHT4 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clip3B9EHT4 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clip3B9EHT4 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clip3B9EHT4 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clip3B9EHT4 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.16□□□□□ -0.3
Clip3B9EHT4 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.16□□□□□ -0.3
Clip3B9EHT4 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Clip3B9EHT4 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.16□□□□□ -0.3
Clip3B9EHT4 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.16□□□□□ -0.3
Clip3B9EHT4 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Clip3B9EHT4 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Clip3B9EHT4 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Clip3B9EHT4 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Clip3B9EHT4 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.16□□□□□ -0.3
Clip3B9EHT4 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Clip3B9EHT4 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clip3B9EHT4 Gm6180-201ENSMUST00000065243 498 ntBASIC13.16□□□□□ -0.3
Clip3B9EHT4 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Clip3B9EHT4 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Clip3B9EHT4 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clip3B9EHT4 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clip3B9EHT4 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clip3B9EHT4 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clip3B9EHT4 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Clip3B9EHT4 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.16□□□□□ -0.3
Clip3B9EHT4 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clip3B9EHT4 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clip3B9EHT4 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clip3B9EHT4 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clip3B9EHT4 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clip3B9EHT4 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clip3B9EHT4 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Clip3B9EHT4 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clip3B9EHT4 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clip3B9EHT4 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clip3B9EHT4 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clip3B9EHT4 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.15□□□□□ -0.3
Clip3B9EHT4 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clip3B9EHT4 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Clip3B9EHT4 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Clip3B9EHT4 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clip3B9EHT4 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clip3B9EHT4 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Clip3B9EHT4 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Clip3B9EHT4 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clip3B9EHT4 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clip3B9EHT4 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clip3B9EHT4 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.15□□□□□ -0.3
Clip3B9EHT4 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clip3B9EHT4 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clip3B9EHT4 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clip3B9EHT4 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Clip3B9EHT4 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clip3B9EHT4 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clip3B9EHT4 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clip3B9EHT4 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.15□□□□□ -0.3
Clip3B9EHT4 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clip3B9EHT4 Gm8927-201ENSMUST00000181978 981 ntBASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms