Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps53Q8CCB4 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps53Q8CCB4 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC15.79■□□□□ 0.12
Vps53Q8CCB4 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Vps53Q8CCB4 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps53Q8CCB4 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps53Q8CCB4 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vps53Q8CCB4 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps53Q8CCB4 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Vps53Q8CCB4 Gm12960-201ENSMUST00000120017 1066 ntBASIC15.79■□□□□ 0.12
Vps53Q8CCB4 Mir1938-201ENSMUST00000158746 100 ntBASIC15.79■□□□□ 0.12
Vps53Q8CCB4 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC15.79■□□□□ 0.12
Vps53Q8CCB4 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.79■□□□□ 0.12
Vps53Q8CCB4 Ighv1-25-201ENSMUST00000195638 345 ntBASIC15.79■□□□□ 0.12
Vps53Q8CCB4 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps53Q8CCB4 CT030704.2-201ENSMUST00000228887 494 ntBASIC15.79■□□□□ 0.12
Vps53Q8CCB4 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps53Q8CCB4 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps53Q8CCB4 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps53Q8CCB4 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps53Q8CCB4 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps53Q8CCB4 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps53Q8CCB4 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps53Q8CCB4 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Vps53Q8CCB4 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Vps53Q8CCB4 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps53Q8CCB4 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vps53Q8CCB4 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC15.79■□□□□ 0.12
Vps53Q8CCB4 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vps53Q8CCB4 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps53Q8CCB4 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps53Q8CCB4 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps53Q8CCB4 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps53Q8CCB4 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Vps53Q8CCB4 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps53Q8CCB4 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps53Q8CCB4 Gm15460-201ENSMUST00000118147 391 ntBASIC15.78■□□□□ 0.12
Vps53Q8CCB4 Gm2445-201ENSMUST00000182798 989 ntBASIC15.78■□□□□ 0.12
Vps53Q8CCB4 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC15.78■□□□□ 0.12
Vps53Q8CCB4 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Vps53Q8CCB4 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps53Q8CCB4 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vps53Q8CCB4 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps53Q8CCB4 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps53Q8CCB4 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps53Q8CCB4 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps53Q8CCB4 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps53Q8CCB4 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps53Q8CCB4 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vps53Q8CCB4 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vps53Q8CCB4 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Vps53Q8CCB4 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Vps53Q8CCB4 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vps53Q8CCB4 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vps53Q8CCB4 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Vps53Q8CCB4 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC15.77■□□□□ 0.12
Vps53Q8CCB4 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Vps53Q8CCB4 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Vps53Q8CCB4 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vps53Q8CCB4 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Vps53Q8CCB4 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vps53Q8CCB4 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vps53Q8CCB4 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vps53Q8CCB4 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC15.77■□□□□ 0.12
Vps53Q8CCB4 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC15.77■□□□□ 0.12
Vps53Q8CCB4 Gm5354-201ENSMUST00000182417 973 ntBASIC15.77■□□□□ 0.12
Vps53Q8CCB4 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC15.77■□□□□ 0.12
Vps53Q8CCB4 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC15.77■□□□□ 0.12
Vps53Q8CCB4 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC15.77■□□□□ 0.12
Vps53Q8CCB4 AC238811.3-201ENSMUST00000225422 709 ntBASIC15.77■□□□□ 0.12
Vps53Q8CCB4 AC159006.1-201ENSMUST00000226396 258 ntBASIC15.77■□□□□ 0.12
Vps53Q8CCB4 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
Vps53Q8CCB4 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vps53Q8CCB4 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Vps53Q8CCB4 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC15.77■□□□□ 0.11
Vps53Q8CCB4 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Vps53Q8CCB4 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Vps53Q8CCB4 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vps53Q8CCB4 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vps53Q8CCB4 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vps53Q8CCB4 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Vps53Q8CCB4 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Vps53Q8CCB4 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vps53Q8CCB4 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vps53Q8CCB4 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Vps53Q8CCB4 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Vps53Q8CCB4 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps53Q8CCB4 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.76■□□□□ 0.11
Vps53Q8CCB4 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Vps53Q8CCB4 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps53Q8CCB4 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps53Q8CCB4 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps53Q8CCB4 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Vps53Q8CCB4 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps53Q8CCB4 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
Vps53Q8CCB4 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps53Q8CCB4 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Vps53Q8CCB4 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Vps53Q8CCB4 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Vps53Q8CCB4 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms