Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim50Q810I2 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim50Q810I2 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim50Q810I2 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim50Q810I2 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim50Q810I2 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim50Q810I2 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trim50Q810I2 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim50Q810I2 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim50Q810I2 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim50Q810I2 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim50Q810I2 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.22□□□□□ -0.29
Trim50Q810I2 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim50Q810I2 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim50Q810I2 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim50Q810I2 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim50Q810I2 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim50Q810I2 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trim50Q810I2 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim50Q810I2 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim50Q810I2 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim50Q810I2 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim50Q810I2 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim50Q810I2 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim50Q810I2 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.22□□□□□ -0.29
Trim50Q810I2 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim50Q810I2 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
Trim50Q810I2 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim50Q810I2 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim50Q810I2 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.22□□□□□ -0.29
Trim50Q810I2 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim50Q810I2 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim50Q810I2 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.21□□□□□ -0.29
Trim50Q810I2 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim50Q810I2 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim50Q810I2 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim50Q810I2 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.21□□□□□ -0.29
Trim50Q810I2 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim50Q810I2 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim50Q810I2 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim50Q810I2 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim50Q810I2 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim50Q810I2 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim50Q810I2 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim50Q810I2 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.21□□□□□ -0.29
Trim50Q810I2 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim50Q810I2 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trim50Q810I2 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Trim50Q810I2 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Trim50Q810I2 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.21□□□□□ -0.29
Trim50Q810I2 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.21□□□□□ -0.29
Trim50Q810I2 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.21□□□□□ -0.29
Trim50Q810I2 Gm42612-201ENSMUST00000197986 623 ntBASIC13.21□□□□□ -0.29
Trim50Q810I2 Gm5279-201ENSMUST00000199575 745 ntBASIC13.21□□□□□ -0.29
Trim50Q810I2 Gm43170-201ENSMUST00000199827 612 ntBASIC13.21□□□□□ -0.29
Trim50Q810I2 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.21□□□□□ -0.29
Trim50Q810I2 Gm44855-201ENSMUST00000205725 362 ntBASIC13.21□□□□□ -0.29
Trim50Q810I2 Gm7730-201ENSMUST00000212486 454 ntBASIC13.21□□□□□ -0.29
Trim50Q810I2 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim50Q810I2 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.21□□□□□ -0.29
Trim50Q810I2 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim50Q810I2 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.21□□□□□ -0.29
Trim50Q810I2 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim50Q810I2 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trim50Q810I2 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim50Q810I2 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Trim50Q810I2 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.21□□□□□ -0.3
Trim50Q810I2 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim50Q810I2 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim50Q810I2 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim50Q810I2 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim50Q810I2 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.21□□□□□ -0.3
Trim50Q810I2 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim50Q810I2 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Trim50Q810I2 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trim50Q810I2 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim50Q810I2 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim50Q810I2 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim50Q810I2 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim50Q810I2 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim50Q810I2 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.2□□□□□ -0.3
Trim50Q810I2 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim50Q810I2 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim50Q810I2 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim50Q810I2 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim50Q810I2 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Trim50Q810I2 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim50Q810I2 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Trim50Q810I2 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trim50Q810I2 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim50Q810I2 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.2□□□□□ -0.3
Trim50Q810I2 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim50Q810I2 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim50Q810I2 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim50Q810I2 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim50Q810I2 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim50Q810I2 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim50Q810I2 Mir6977-201ENSMUST00000184960 64 ntBASIC13.2□□□□□ -0.3
Trim50Q810I2 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.2□□□□□ -0.3
Trim50Q810I2 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms