Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
MSH6P52701 HNRNPA1P48-201ENST00000562726 1377 ntBASIC22.61■■□□□ 1.21
MSH6P52701 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
MSH6P52701 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC22.61■■□□□ 1.21
MSH6P52701 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
MSH6P52701 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC22.61■■□□□ 1.21
MSH6P52701 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
MSH6P52701 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
MSH6P52701 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
MSH6P52701 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
MSH6P52701 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
MSH6P52701 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
MSH6P52701 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
MSH6P52701 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
MSH6P52701 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC22.61■■□□□ 1.21
MSH6P52701 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
MSH6P52701 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
MSH6P52701 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
MSH6P52701 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
MSH6P52701 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC22.61■■□□□ 1.21
MSH6P52701 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
MSH6P52701 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC22.61■■□□□ 1.21
MSH6P52701 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
MSH6P52701 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
MSH6P52701 AP001889.1-201ENST00000525414 633 ntBASIC22.61■■□□□ 1.21
MSH6P52701 PTP4A1P2-201ENST00000546033 454 ntBASIC22.61■■□□□ 1.21
MSH6P52701 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC22.61■■□□□ 1.21
MSH6P52701 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC22.61■■□□□ 1.21
MSH6P52701 AC020765.3-201ENST00000613051 740 ntBASIC22.61■■□□□ 1.21
MSH6P52701 AL158212.4-201ENST00000624062 1286 ntBASIC22.61■■□□□ 1.21
MSH6P52701 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC22.61■■□□□ 1.21
MSH6P52701 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
MSH6P52701 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC22.61■■□□□ 1.21
MSH6P52701 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
MSH6P52701 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
MSH6P52701 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
MSH6P52701 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
MSH6P52701 AC018470.1-201ENST00000624790 3129 ntBASIC22.6■■□□□ 1.21
MSH6P52701 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
MSH6P52701 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
MSH6P52701 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC22.6■■□□□ 1.21
MSH6P52701 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
MSH6P52701 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC22.6■■□□□ 1.21
MSH6P52701 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
MSH6P52701 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
MSH6P52701 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
MSH6P52701 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
MSH6P52701 CALR4P-201ENST00000431943 946 ntBASIC22.6■■□□□ 1.21
MSH6P52701 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC22.6■■□□□ 1.21
MSH6P52701 RN7SL560P-201ENST00000577943 264 ntBASIC22.6■■□□□ 1.21
MSH6P52701 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC22.6■■□□□ 1.21
MSH6P52701 AL365330.1-201ENST00000607459 531 ntBASIC22.6■■□□□ 1.21
MSH6P52701 MIR6727-201ENST00000620702 65 ntBASIC22.6■■□□□ 1.21
MSH6P52701 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
MSH6P52701 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
MSH6P52701 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
MSH6P52701 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
MSH6P52701 TP73-213ENST00000604479 1623 ntTSL 5 BASIC22.59■■□□□ 1.21
MSH6P52701 AC006277.1-201ENST00000624348 1610 ntBASIC22.59■■□□□ 1.21
MSH6P52701 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
MSH6P52701 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
MSH6P52701 AL355864.2-201ENST00000447420 863 ntBASIC22.59■■□□□ 1.21
MSH6P52701 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC22.59■■□□□ 1.21
MSH6P52701 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC22.59■■□□□ 1.21
MSH6P52701 AC079316.1-201ENST00000548397 411 ntBASIC22.59■■□□□ 1.21
MSH6P52701 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC22.59■■□□□ 1.21
MSH6P52701 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC22.59■■□□□ 1.21
MSH6P52701 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
MSH6P52701 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
MSH6P52701 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
MSH6P52701 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC22.59■■□□□ 1.21
MSH6P52701 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
MSH6P52701 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
MSH6P52701 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
MSH6P52701 KRT8P39-201ENST00000396270 1433 ntBASIC22.58■■□□□ 1.21
MSH6P52701 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
MSH6P52701 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
MSH6P52701 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC22.58■■□□□ 1.21
MSH6P52701 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC22.58■■□□□ 1.21
MSH6P52701 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
MSH6P52701 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
MSH6P52701 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC22.58■■□□□ 1.21
MSH6P52701 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
MSH6P52701 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
MSH6P52701 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
MSH6P52701 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC22.58■■□□□ 1.21
MSH6P52701 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
MSH6P52701 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
MSH6P52701 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC22.58■■□□□ 1.21
MSH6P52701 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC22.58■■□□□ 1.21
MSH6P52701 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC22.58■■□□□ 1.21
MSH6P52701 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC22.58■■□□□ 1.21
MSH6P52701 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
MSH6P52701 AC091271.1-201ENST00000611877 1162 ntBASIC22.58■■□□□ 1.21
MSH6P52701 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
MSH6P52701 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
MSH6P52701 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
MSH6P52701 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
MSH6P52701 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC22.58■■□□□ 1.2
MSH6P52701 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms