Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cldn6Q9Z262 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cldn6Q9Z262 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cldn6Q9Z262 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cldn6Q9Z262 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cldn6Q9Z262 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cldn6Q9Z262 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cldn6Q9Z262 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cldn6Q9Z262 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cldn6Q9Z262 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cldn6Q9Z262 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cldn6Q9Z262 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cldn6Q9Z262 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cldn6Q9Z262 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.74□□□□□ -0.37
Cldn6Q9Z262 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn6Q9Z262 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn6Q9Z262 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn6Q9Z262 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.73□□□□□ -0.37
Cldn6Q9Z262 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn6Q9Z262 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn6Q9Z262 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.73□□□□□ -0.37
Cldn6Q9Z262 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn6Q9Z262 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn6Q9Z262 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn6Q9Z262 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn6Q9Z262 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn6Q9Z262 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn6Q9Z262 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn6Q9Z262 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn6Q9Z262 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn6Q9Z262 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn6Q9Z262 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn6Q9Z262 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.73□□□□□ -0.37
Cldn6Q9Z262 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn6Q9Z262 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn6Q9Z262 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.73□□□□□ -0.37
Cldn6Q9Z262 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.73□□□□□ -0.37
Cldn6Q9Z262 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.73□□□□□ -0.37
Cldn6Q9Z262 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Cldn6Q9Z262 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.73□□□□□ -0.37
Cldn6Q9Z262 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Cldn6Q9Z262 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Cldn6Q9Z262 Grk6-205ENSMUST00000224653 2976 ntBASIC12.73□□□□□ -0.37
Cldn6Q9Z262 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn6Q9Z262 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn6Q9Z262 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn6Q9Z262 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn6Q9Z262 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn6Q9Z262 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn6Q9Z262 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn6Q9Z262 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.73□□□□□ -0.37
Cldn6Q9Z262 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn6Q9Z262 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cldn6Q9Z262 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.72□□□□□ -0.37
Cldn6Q9Z262 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cldn6Q9Z262 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Cldn6Q9Z262 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldn6Q9Z262 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cldn6Q9Z262 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.72□□□□□ -0.37
Cldn6Q9Z262 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldn6Q9Z262 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldn6Q9Z262 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.72□□□□□ -0.37
Cldn6Q9Z262 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.72□□□□□ -0.37
Cldn6Q9Z262 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.72□□□□□ -0.37
Cldn6Q9Z262 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
Cldn6Q9Z262 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cldn6Q9Z262 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldn6Q9Z262 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cldn6Q9Z262 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldn6Q9Z262 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.72□□□□□ -0.37
Cldn6Q9Z262 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldn6Q9Z262 Gm24694-201ENSMUST00000180054 110 ntBASIC12.72□□□□□ -0.37
Cldn6Q9Z262 Gm27663-201ENSMUST00000184839 110 ntBASIC12.72□□□□□ -0.37
Cldn6Q9Z262 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.72□□□□□ -0.37
Cldn6Q9Z262 Gm20949-201ENSMUST00000206478 952 ntBASIC12.72□□□□□ -0.37
Cldn6Q9Z262 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cldn6Q9Z262 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.72□□□□□ -0.37
Cldn6Q9Z262 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cldn6Q9Z262 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.72□□□□□ -0.37
Cldn6Q9Z262 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.72□□□□□ -0.37
Cldn6Q9Z262 Gm9797-201ENSMUST00000052902 613 ntBASIC12.72□□□□□ -0.37
Cldn6Q9Z262 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.72□□□□□ -0.37
Cldn6Q9Z262 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldn6Q9Z262 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Cldn6Q9Z262 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Cldn6Q9Z262 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.72□□□□□ -0.37
Cldn6Q9Z262 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cldn6Q9Z262 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cldn6Q9Z262 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldn6Q9Z262 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.72□□□□□ -0.37
Cldn6Q9Z262 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cldn6Q9Z262 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldn6Q9Z262 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cldn6Q9Z262 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cldn6Q9Z262 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.72□□□□□ -0.37
Cldn6Q9Z262 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cldn6Q9Z262 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldn6Q9Z262 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cldn6Q9Z262 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.72□□□□□ -0.37
Cldn6Q9Z262 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms