Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim16Q99PP9 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim16Q99PP9 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim16Q99PP9 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim16Q99PP9 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim16Q99PP9 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim16Q99PP9 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim16Q99PP9 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trim16Q99PP9 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.31□□□□□ -0.28
Trim16Q99PP9 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.31□□□□□ -0.28
Trim16Q99PP9 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trim16Q99PP9 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trim16Q99PP9 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim16Q99PP9 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim16Q99PP9 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim16Q99PP9 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.31□□□□□ -0.28
Trim16Q99PP9 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim16Q99PP9 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.31□□□□□ -0.28
Trim16Q99PP9 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trim16Q99PP9 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Trim16Q99PP9 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim16Q99PP9 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim16Q99PP9 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim16Q99PP9 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim16Q99PP9 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim16Q99PP9 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim16Q99PP9 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim16Q99PP9 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trim16Q99PP9 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim16Q99PP9 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim16Q99PP9 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim16Q99PP9 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim16Q99PP9 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim16Q99PP9 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim16Q99PP9 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim16Q99PP9 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Trim16Q99PP9 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim16Q99PP9 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim16Q99PP9 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trim16Q99PP9 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim16Q99PP9 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Trim16Q99PP9 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.3□□□□□ -0.28
Trim16Q99PP9 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.3□□□□□ -0.28
Trim16Q99PP9 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.3□□□□□ -0.28
Trim16Q99PP9 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim16Q99PP9 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim16Q99PP9 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim16Q99PP9 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.3□□□□□ -0.28
Trim16Q99PP9 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Trim16Q99PP9 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim16Q99PP9 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim16Q99PP9 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim16Q99PP9 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim16Q99PP9 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim16Q99PP9 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim16Q99PP9 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim16Q99PP9 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim16Q99PP9 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim16Q99PP9 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim16Q99PP9 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trim16Q99PP9 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim16Q99PP9 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim16Q99PP9 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim16Q99PP9 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim16Q99PP9 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim16Q99PP9 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim16Q99PP9 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.29□□□□□ -0.28
Trim16Q99PP9 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim16Q99PP9 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim16Q99PP9 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.29□□□□□ -0.28
Trim16Q99PP9 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim16Q99PP9 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim16Q99PP9 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim16Q99PP9 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim16Q99PP9 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim16Q99PP9 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.29□□□□□ -0.28
Trim16Q99PP9 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim16Q99PP9 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim16Q99PP9 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trim16Q99PP9 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim16Q99PP9 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.29□□□□□ -0.28
Trim16Q99PP9 Gm12151-201ENSMUST00000121374 290 ntBASIC13.29□□□□□ -0.28
Trim16Q99PP9 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim16Q99PP9 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim16Q99PP9 Gm3436-201ENSMUST00000179930 840 ntBASIC13.29□□□□□ -0.28
Trim16Q99PP9 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim16Q99PP9 Gm33320-201ENSMUST00000192232 530 ntBASIC13.29□□□□□ -0.28
Trim16Q99PP9 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trim16Q99PP9 Gm20949-201ENSMUST00000206478 952 ntBASIC13.29□□□□□ -0.28
Trim16Q99PP9 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim16Q99PP9 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.29□□□□□ -0.28
Trim16Q99PP9 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim16Q99PP9 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim16Q99PP9 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim16Q99PP9 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim16Q99PP9 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim16Q99PP9 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim16Q99PP9 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim16Q99PP9 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim16Q99PP9 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms