Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc58Q8R3Q6 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc58Q8R3Q6 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc58Q8R3Q6 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc58Q8R3Q6 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc58Q8R3Q6 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc58Q8R3Q6 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc58Q8R3Q6 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc58Q8R3Q6 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc58Q8R3Q6 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc58Q8R3Q6 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc58Q8R3Q6 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc58Q8R3Q6 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc58Q8R3Q6 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc58Q8R3Q6 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc58Q8R3Q6 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.19□□□□□ -0.46
Ccdc58Q8R3Q6 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc58Q8R3Q6 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc58Q8R3Q6 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc58Q8R3Q6 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc58Q8R3Q6 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc58Q8R3Q6 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc58Q8R3Q6 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc58Q8R3Q6 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc58Q8R3Q6 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc58Q8R3Q6 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc58Q8R3Q6 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc58Q8R3Q6 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc58Q8R3Q6 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.17□□□□□ -0.46
Ccdc58Q8R3Q6 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc58Q8R3Q6 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc58Q8R3Q6 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.17□□□□□ -0.46
Ccdc58Q8R3Q6 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc58Q8R3Q6 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.17□□□□□ -0.46
Ccdc58Q8R3Q6 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.17□□□□□ -0.46
Ccdc58Q8R3Q6 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc58Q8R3Q6 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc58Q8R3Q6 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc58Q8R3Q6 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc58Q8R3Q6 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc58Q8R3Q6 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.17□□□□□ -0.46
Ccdc58Q8R3Q6 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc58Q8R3Q6 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc58Q8R3Q6 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc58Q8R3Q6 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc58Q8R3Q6 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc58Q8R3Q6 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc58Q8R3Q6 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc58Q8R3Q6 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc58Q8R3Q6 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc58Q8R3Q6 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc58Q8R3Q6 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc58Q8R3Q6 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc58Q8R3Q6 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.16□□□□□ -0.46
Ccdc58Q8R3Q6 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc58Q8R3Q6 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms