Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Gm10040-201ENSMUST00000080726 1662 ntBASIC17.54■□□□□ 0.4
Rab11fip3Q8CHD8 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rab11fip3Q8CHD8 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rab11fip3Q8CHD8 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rab11fip3Q8CHD8 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Rab11fip3Q8CHD8 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rab11fip3Q8CHD8 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rab11fip3Q8CHD8 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rab11fip3Q8CHD8 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Rab11fip3Q8CHD8 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rab11fip3Q8CHD8 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rab11fip3Q8CHD8 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Rab11fip3Q8CHD8 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Rab11fip3Q8CHD8 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Rab11fip3Q8CHD8 Gm12957-201ENSMUST00000117835 377 ntBASIC17.53■□□□□ 0.4
Rab11fip3Q8CHD8 Gm16177-201ENSMUST00000120728 718 ntBASIC17.53■□□□□ 0.4
Rab11fip3Q8CHD8 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC17.53■□□□□ 0.4
Rab11fip3Q8CHD8 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Rab11fip3Q8CHD8 Gm42929-201ENSMUST00000198374 1286 ntBASIC17.53■□□□□ 0.4
Rab11fip3Q8CHD8 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC17.53■□□□□ 0.4
Rab11fip3Q8CHD8 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rab11fip3Q8CHD8 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rab11fip3Q8CHD8 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rab11fip3Q8CHD8 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rab11fip3Q8CHD8 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rab11fip3Q8CHD8 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rab11fip3Q8CHD8 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rab11fip3Q8CHD8 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC17.53■□□□□ 0.4
Rab11fip3Q8CHD8 Gm42872-201ENSMUST00000200026 1967 ntBASIC17.53■□□□□ 0.4
Rab11fip3Q8CHD8 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Rab11fip3Q8CHD8 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rab11fip3Q8CHD8 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rab11fip3Q8CHD8 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Rab11fip3Q8CHD8 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC17.52■□□□□ 0.4
Rab11fip3Q8CHD8 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rab11fip3Q8CHD8 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rab11fip3Q8CHD8 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rab11fip3Q8CHD8 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Rab11fip3Q8CHD8 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rab11fip3Q8CHD8 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rab11fip3Q8CHD8 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rab11fip3Q8CHD8 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC17.52■□□□□ 0.4
Rab11fip3Q8CHD8 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rab11fip3Q8CHD8 Gm12203-201ENSMUST00000118235 598 ntBASIC17.52■□□□□ 0.4
Rab11fip3Q8CHD8 Gm12209-201ENSMUST00000120089 596 ntBASIC17.52■□□□□ 0.4
Rab11fip3Q8CHD8 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC17.52■□□□□ 0.4
Rab11fip3Q8CHD8 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC17.52■□□□□ 0.4
Rab11fip3Q8CHD8 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC17.52■□□□□ 0.4
Rab11fip3Q8CHD8 Gm4271-201ENSMUST00000174444 973 ntBASIC17.52■□□□□ 0.4
Rab11fip3Q8CHD8 Gm37424-201ENSMUST00000191727 561 ntBASIC17.52■□□□□ 0.4
Rab11fip3Q8CHD8 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rab11fip3Q8CHD8 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC17.52■□□□□ 0.4
Rab11fip3Q8CHD8 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rab11fip3Q8CHD8 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Rab11fip3Q8CHD8 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rab11fip3Q8CHD8 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
Rab11fip3Q8CHD8 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Rab11fip3Q8CHD8 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rab11fip3Q8CHD8 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rab11fip3Q8CHD8 Gm43056-201ENSMUST00000197865 2791 ntBASIC17.51■□□□□ 0.39
Rab11fip3Q8CHD8 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rab11fip3Q8CHD8 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rab11fip3Q8CHD8 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC17.51■□□□□ 0.39
Rab11fip3Q8CHD8 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC17.51■□□□□ 0.39
Rab11fip3Q8CHD8 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rab11fip3Q8CHD8 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rab11fip3Q8CHD8 Gm2639-201ENSMUST00000156881 1297 ntBASIC17.51■□□□□ 0.39
Rab11fip3Q8CHD8 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rab11fip3Q8CHD8 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC17.51■□□□□ 0.39
Rab11fip3Q8CHD8 Gm37922-201ENSMUST00000195596 455 ntBASIC17.51■□□□□ 0.39
Rab11fip3Q8CHD8 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rab11fip3Q8CHD8 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC17.51■□□□□ 0.39
Rab11fip3Q8CHD8 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rab11fip3Q8CHD8 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC17.51■□□□□ 0.39
Rab11fip3Q8CHD8 AC096628.2-201ENSMUST00000225443 1413 ntBASIC17.51■□□□□ 0.39
Rab11fip3Q8CHD8 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rab11fip3Q8CHD8 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rab11fip3Q8CHD8 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rab11fip3Q8CHD8 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Rab11fip3Q8CHD8 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Rab11fip3Q8CHD8 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rab11fip3Q8CHD8 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rab11fip3Q8CHD8 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Rab11fip3Q8CHD8 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rab11fip3Q8CHD8 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC17.51■□□□□ 0.39
Rab11fip3Q8CHD8 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rab11fip3Q8CHD8 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rab11fip3Q8CHD8 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rab11fip3Q8CHD8 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rab11fip3Q8CHD8 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC17.5■□□□□ 0.39
Rab11fip3Q8CHD8 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rab11fip3Q8CHD8 Abhd6-203ENSMUST00000225234 1958 ntBASIC17.5■□□□□ 0.39
Rab11fip3Q8CHD8 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rab11fip3Q8CHD8 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Rab11fip3Q8CHD8 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC17.5■□□□□ 0.39
Rab11fip3Q8CHD8 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rab11fip3Q8CHD8 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rab11fip3Q8CHD8 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rab11fip3Q8CHD8 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC17.5■□□□□ 0.39
Rab11fip3Q8CHD8 Gm37497-201ENSMUST00000195830 798 ntBASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms