Protein–RNA interactions for Protein: Q78WZ7

Twistnb, DNA-directed RNA polymerase I subunit RPA43, mousemouse

Known RBP Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TwistnbQ78WZ7 Gm5864-201ENSMUST00000202263 970 ntBASIC13.83□□□□□ -0.2
TwistnbQ78WZ7 Gm18027-201ENSMUST00000218947 619 ntBASIC13.83□□□□□ -0.2
TwistnbQ78WZ7 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TwistnbQ78WZ7 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TwistnbQ78WZ7 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
TwistnbQ78WZ7 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TwistnbQ78WZ7 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TwistnbQ78WZ7 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TwistnbQ78WZ7 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.83□□□□□ -0.2
TwistnbQ78WZ7 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
TwistnbQ78WZ7 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TwistnbQ78WZ7 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TwistnbQ78WZ7 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TwistnbQ78WZ7 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TwistnbQ78WZ7 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TwistnbQ78WZ7 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TwistnbQ78WZ7 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TwistnbQ78WZ7 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.82□□□□□ -0.2
TwistnbQ78WZ7 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TwistnbQ78WZ7 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TwistnbQ78WZ7 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
TwistnbQ78WZ7 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TwistnbQ78WZ7 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TwistnbQ78WZ7 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TwistnbQ78WZ7 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TwistnbQ78WZ7 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TwistnbQ78WZ7 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TwistnbQ78WZ7 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TwistnbQ78WZ7 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TwistnbQ78WZ7 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TwistnbQ78WZ7 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TwistnbQ78WZ7 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TwistnbQ78WZ7 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TwistnbQ78WZ7 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.82□□□□□ -0.2
TwistnbQ78WZ7 Gm13823-201ENSMUST00000119930 345 ntBASIC13.82□□□□□ -0.2
TwistnbQ78WZ7 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TwistnbQ78WZ7 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.82□□□□□ -0.2
TwistnbQ78WZ7 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TwistnbQ78WZ7 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TwistnbQ78WZ7 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
TwistnbQ78WZ7 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.82□□□□□ -0.2
TwistnbQ78WZ7 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TwistnbQ78WZ7 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TwistnbQ78WZ7 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TwistnbQ78WZ7 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TwistnbQ78WZ7 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TwistnbQ78WZ7 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TwistnbQ78WZ7 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TwistnbQ78WZ7 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TwistnbQ78WZ7 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.82□□□□□ -0.2
TwistnbQ78WZ7 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
TwistnbQ78WZ7 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TwistnbQ78WZ7 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TwistnbQ78WZ7 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TwistnbQ78WZ7 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TwistnbQ78WZ7 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TwistnbQ78WZ7 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TwistnbQ78WZ7 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TwistnbQ78WZ7 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TwistnbQ78WZ7 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TwistnbQ78WZ7 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TwistnbQ78WZ7 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TwistnbQ78WZ7 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TwistnbQ78WZ7 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TwistnbQ78WZ7 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
TwistnbQ78WZ7 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TwistnbQ78WZ7 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TwistnbQ78WZ7 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.81□□□□□ -0.2
TwistnbQ78WZ7 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.81□□□□□ -0.2
TwistnbQ78WZ7 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TwistnbQ78WZ7 Gm9103-201ENSMUST00000119371 405 ntBASIC13.81□□□□□ -0.2
TwistnbQ78WZ7 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.81□□□□□ -0.2
TwistnbQ78WZ7 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TwistnbQ78WZ7 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.81□□□□□ -0.2
TwistnbQ78WZ7 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TwistnbQ78WZ7 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.81□□□□□ -0.2
TwistnbQ78WZ7 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.81□□□□□ -0.2
TwistnbQ78WZ7 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TwistnbQ78WZ7 Mir8098-201ENSMUST00000184011 137 ntBASIC13.81□□□□□ -0.2
TwistnbQ78WZ7 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.81□□□□□ -0.2
TwistnbQ78WZ7 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.81□□□□□ -0.2
TwistnbQ78WZ7 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.81□□□□□ -0.2
TwistnbQ78WZ7 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TwistnbQ78WZ7 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TwistnbQ78WZ7 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TwistnbQ78WZ7 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TwistnbQ78WZ7 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.81□□□□□ -0.2
TwistnbQ78WZ7 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TwistnbQ78WZ7 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.81□□□□□ -0.2
TwistnbQ78WZ7 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TwistnbQ78WZ7 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TwistnbQ78WZ7 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TwistnbQ78WZ7 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
TwistnbQ78WZ7 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TwistnbQ78WZ7 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TwistnbQ78WZ7 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.8□□□□□ -0.2
TwistnbQ78WZ7 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TwistnbQ78WZ7 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TwistnbQ78WZ7 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TwistnbQ78WZ7 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms