Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vma21Q78T54 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vma21Q78T54 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vma21Q78T54 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Vma21Q78T54 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Vma21Q78T54 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vma21Q78T54 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Vma21Q78T54 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC11.06□□□□□ -0.64
Vma21Q78T54 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vma21Q78T54 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vma21Q78T54 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vma21Q78T54 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Vma21Q78T54 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vma21Q78T54 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vma21Q78T54 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC11.06□□□□□ -0.64
Vma21Q78T54 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vma21Q78T54 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vma21Q78T54 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vma21Q78T54 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Vma21Q78T54 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vma21Q78T54 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vma21Q78T54 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vma21Q78T54 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vma21Q78T54 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Vma21Q78T54 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vma21Q78T54 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.06□□□□□ -0.64
Vma21Q78T54 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Vma21Q78T54 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC11.06□□□□□ -0.64
Vma21Q78T54 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Vma21Q78T54 Gm25911-201ENSMUST00000157621 56 ntBASIC11.06□□□□□ -0.64
Vma21Q78T54 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Vma21Q78T54 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC11.06□□□□□ -0.64
Vma21Q78T54 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vma21Q78T54 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vma21Q78T54 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vma21Q78T54 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Vma21Q78T54 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Vma21Q78T54 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Vma21Q78T54 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Vma21Q78T54 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Vma21Q78T54 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vma21Q78T54 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Vma21Q78T54 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Vma21Q78T54 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vma21Q78T54 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Vma21Q78T54 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Vma21Q78T54 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vma21Q78T54 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vma21Q78T54 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vma21Q78T54 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vma21Q78T54 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Vma21Q78T54 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vma21Q78T54 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vma21Q78T54 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Vma21Q78T54 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Vma21Q78T54 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vma21Q78T54 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vma21Q78T54 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vma21Q78T54 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vma21Q78T54 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vma21Q78T54 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vma21Q78T54 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.05□□□□□ -0.64
Vma21Q78T54 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vma21Q78T54 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vma21Q78T54 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vma21Q78T54 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vma21Q78T54 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Vma21Q78T54 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Vma21Q78T54 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vma21Q78T54 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vma21Q78T54 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vma21Q78T54 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Vma21Q78T54 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Vma21Q78T54 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Vma21Q78T54 Gm24543-201ENSMUST00000103867 82 ntBASIC11.05□□□□□ -0.64
Vma21Q78T54 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vma21Q78T54 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Vma21Q78T54 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vma21Q78T54 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vma21Q78T54 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Vma21Q78T54 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vma21Q78T54 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.05□□□□□ -0.64
Vma21Q78T54 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Vma21Q78T54 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC11.05□□□□□ -0.64
Vma21Q78T54 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.05□□□□□ -0.64
Vma21Q78T54 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.05□□□□□ -0.64
Vma21Q78T54 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vma21Q78T54 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Vma21Q78T54 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vma21Q78T54 Gm16476-201ENSMUST00000221544 139 ntBASIC11.05□□□□□ -0.64
Vma21Q78T54 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Vma21Q78T54 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.05□□□□□ -0.64
Vma21Q78T54 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vma21Q78T54 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vma21Q78T54 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vma21Q78T54 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vma21Q78T54 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vma21Q78T54 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vma21Q78T54 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Vma21Q78T54 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms