Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
Scn1bP97952 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1bP97952 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1bP97952 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1bP97952 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1bP97952 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1bP97952 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1bP97952 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1bP97952 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Scn1bP97952 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn1bP97952 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn1bP97952 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Scn1bP97952 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn1bP97952 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn1bP97952 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn1bP97952 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn1bP97952 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn1bP97952 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.4□□□□□ -0.42
Scn1bP97952 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scn1bP97952 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn1bP97952 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn1bP97952 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn1bP97952 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scn1bP97952 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.4□□□□□ -0.42
Scn1bP97952 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn1bP97952 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn1bP97952 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn1bP97952 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn1bP97952 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scn1bP97952 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn1bP97952 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scn1bP97952 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Scn1bP97952 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn1bP97952 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn1bP97952 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Scn1bP97952 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Scn1bP97952 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Scn1bP97952 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Scn1bP97952 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.39□□□□□ -0.43
Scn1bP97952 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn1bP97952 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn1bP97952 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Scn1bP97952 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn1bP97952 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Scn1bP97952 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn1bP97952 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.39□□□□□ -0.43
Scn1bP97952 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn1bP97952 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Scn1bP97952 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Scn1bP97952 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.39□□□□□ -0.43
Scn1bP97952 Gm12350-201ENSMUST00000121208 462 ntBASIC12.39□□□□□ -0.43
Scn1bP97952 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.39□□□□□ -0.43
Scn1bP97952 Gm18733-201ENSMUST00000173950 856 ntBASIC12.39□□□□□ -0.43
Scn1bP97952 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Scn1bP97952 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.39□□□□□ -0.43
Scn1bP97952 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn1bP97952 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.39□□□□□ -0.43
Scn1bP97952 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.39□□□□□ -0.43
Scn1bP97952 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn1bP97952 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn1bP97952 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.39□□□□□ -0.43
Scn1bP97952 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Scn1bP97952 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn1bP97952 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn1bP97952 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Scn1bP97952 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Scn1bP97952 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Scn1bP97952 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.39□□□□□ -0.43
Scn1bP97952 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Scn1bP97952 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn1bP97952 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Scn1bP97952 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Scn1bP97952 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn1bP97952 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn1bP97952 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.39□□□□□ -0.43
Scn1bP97952 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.38□□□□□ -0.43
Scn1bP97952 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1bP97952 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1bP97952 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1bP97952 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1bP97952 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1bP97952 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1bP97952 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1bP97952 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1bP97952 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1bP97952 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1bP97952 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1bP97952 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1bP97952 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1bP97952 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1bP97952 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Scn1bP97952 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Scn1bP97952 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1bP97952 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.38□□□□□ -0.43
Scn1bP97952 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1bP97952 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1bP97952 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.38□□□□□ -0.43
Scn1bP97952 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1bP97952 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.38□□□□□ -0.43
Scn1bP97952 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms