Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
TcraP01849 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
TcraP01849 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
TcraP01849 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
TcraP01849 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
TcraP01849 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
TcraP01849 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
TcraP01849 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
TcraP01849 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
TcraP01849 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
TcraP01849 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
TcraP01849 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
TcraP01849 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
TcraP01849 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
TcraP01849 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC9.91□□□□□ -0.82
TcraP01849 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC9.91□□□□□ -0.82
TcraP01849 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
TcraP01849 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
TcraP01849 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
TcraP01849 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
TcraP01849 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
TcraP01849 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
TcraP01849 Rab3c-202ENSMUST00000223922 2398 ntBASIC9.91□□□□□ -0.82
TcraP01849 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC9.91□□□□□ -0.82
TcraP01849 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC9.91□□□□□ -0.82
TcraP01849 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
TcraP01849 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
TcraP01849 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
TcraP01849 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC9.91□□□□□ -0.82
TcraP01849 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
TcraP01849 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
TcraP01849 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC9.91□□□□□ -0.82
TcraP01849 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC9.91□□□□□ -0.82
TcraP01849 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC9.91□□□□□ -0.82
TcraP01849 Gm9449-201ENSMUST00000207265 1011 ntBASIC9.91□□□□□ -0.82
TcraP01849 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
TcraP01849 AC131690.1-201ENSMUST00000218406 374 ntBASIC9.91□□□□□ -0.82
TcraP01849 AC147366.1-201ENSMUST00000227671 852 ntBASIC9.91□□□□□ -0.82
TcraP01849 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
TcraP01849 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
TcraP01849 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
TcraP01849 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
TcraP01849 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC9.91□□□□□ -0.82
TcraP01849 Gm15590-201ENSMUST00000078419 552 ntBASIC9.91□□□□□ -0.82
TcraP01849 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
TcraP01849 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
TcraP01849 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
TcraP01849 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
TcraP01849 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
TcraP01849 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
TcraP01849 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
TcraP01849 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
TcraP01849 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
TcraP01849 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
TcraP01849 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
TcraP01849 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
TcraP01849 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC9.91□□□□□ -0.82
TcraP01849 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
TcraP01849 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
TcraP01849 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
TcraP01849 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
TcraP01849 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
TcraP01849 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC9.9□□□□□ -0.82
TcraP01849 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
TcraP01849 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
TcraP01849 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
TcraP01849 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
TcraP01849 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
TcraP01849 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC9.9□□□□□ -0.82
TcraP01849 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
TcraP01849 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
TcraP01849 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
TcraP01849 Gm26616-202ENSMUST00000195676 3107 ntBASIC9.9□□□□□ -0.82
TcraP01849 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
TcraP01849 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
TcraP01849 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
TcraP01849 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
TcraP01849 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
TcraP01849 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
TcraP01849 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
TcraP01849 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC9.9□□□□□ -0.82
TcraP01849 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
TcraP01849 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
TcraP01849 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
TcraP01849 Mir5126-201ENSMUST00000175513 77 ntBASIC9.9□□□□□ -0.82
TcraP01849 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
TcraP01849 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
TcraP01849 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
TcraP01849 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
TcraP01849 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC9.9□□□□□ -0.82
TcraP01849 Gm8597-201ENSMUST00000191525 1109 ntBASIC9.9□□□□□ -0.82
TcraP01849 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC9.9□□□□□ -0.82
TcraP01849 Gm5712-201ENSMUST00000199748 1043 ntBASIC9.9□□□□□ -0.82
TcraP01849 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC9.9□□□□□ -0.82
TcraP01849 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC9.9□□□□□ -0.82
TcraP01849 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
TcraP01849 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
TcraP01849 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
TcraP01849 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
TcraP01849 Gm5763-201ENSMUST00000155951 1530 ntBASIC9.9□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms