Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Colca2F8VPY8 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Colca2F8VPY8 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Colca2F8VPY8 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Colca2F8VPY8 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Colca2F8VPY8 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Colca2F8VPY8 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Colca2F8VPY8 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.76□□□□□ -0.37
Colca2F8VPY8 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Colca2F8VPY8 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Colca2F8VPY8 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Colca2F8VPY8 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Colca2F8VPY8 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Colca2F8VPY8 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Colca2F8VPY8 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Colca2F8VPY8 Gm11930-201ENSMUST00000117788 190 ntBASIC12.75□□□□□ -0.37
Colca2F8VPY8 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.75□□□□□ -0.37
Colca2F8VPY8 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Colca2F8VPY8 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.75□□□□□ -0.37
Colca2F8VPY8 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Colca2F8VPY8 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Colca2F8VPY8 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Colca2F8VPY8 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Colca2F8VPY8 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.75□□□□□ -0.37
Colca2F8VPY8 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Colca2F8VPY8 Gm5950-201ENSMUST00000213337 772 ntBASIC12.75□□□□□ -0.37
Colca2F8VPY8 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.75□□□□□ -0.37
Colca2F8VPY8 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.75□□□□□ -0.37
Colca2F8VPY8 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.75□□□□□ -0.37
Colca2F8VPY8 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.75□□□□□ -0.37
Colca2F8VPY8 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Colca2F8VPY8 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Colca2F8VPY8 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Colca2F8VPY8 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Colca2F8VPY8 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Colca2F8VPY8 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Colca2F8VPY8 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Colca2F8VPY8 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Colca2F8VPY8 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Colca2F8VPY8 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Colca2F8VPY8 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Colca2F8VPY8 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Colca2F8VPY8 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.75□□□□□ -0.37
Colca2F8VPY8 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Colca2F8VPY8 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Colca2F8VPY8 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Colca2F8VPY8 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Colca2F8VPY8 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Colca2F8VPY8 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Colca2F8VPY8 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Colca2F8VPY8 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Colca2F8VPY8 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Colca2F8VPY8 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.74□□□□□ -0.37
Colca2F8VPY8 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Colca2F8VPY8 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Colca2F8VPY8 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.74□□□□□ -0.37
Colca2F8VPY8 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Colca2F8VPY8 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Colca2F8VPY8 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Colca2F8VPY8 Gm25214-201ENSMUST00000104573 129 ntBASIC12.74□□□□□ -0.37
Colca2F8VPY8 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Colca2F8VPY8 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.74□□□□□ -0.37
Colca2F8VPY8 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.74□□□□□ -0.37
Colca2F8VPY8 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Colca2F8VPY8 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Colca2F8VPY8 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.74□□□□□ -0.37
Colca2F8VPY8 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Colca2F8VPY8 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Colca2F8VPY8 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Colca2F8VPY8 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Colca2F8VPY8 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Colca2F8VPY8 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.74□□□□□ -0.37
Colca2F8VPY8 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Colca2F8VPY8 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Colca2F8VPY8 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Colca2F8VPY8 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Colca2F8VPY8 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Colca2F8VPY8 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Colca2F8VPY8 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Colca2F8VPY8 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Colca2F8VPY8 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Colca2F8VPY8 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Colca2F8VPY8 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Colca2F8VPY8 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Colca2F8VPY8 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Colca2F8VPY8 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Colca2F8VPY8 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Colca2F8VPY8 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Colca2F8VPY8 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Colca2F8VPY8 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Colca2F8VPY8 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Colca2F8VPY8 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.73□□□□□ -0.37
Colca2F8VPY8 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Colca2F8VPY8 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.73□□□□□ -0.37
Colca2F8VPY8 Snord83b-201ENSMUST00000104546 94 ntBASIC12.73□□□□□ -0.37
Colca2F8VPY8 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Colca2F8VPY8 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Colca2F8VPY8 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Colca2F8VPY8 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.73□□□□□ -0.37
Colca2F8VPY8 Gm22334-201ENSMUST00000158070 133 ntBASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms